 |
Information for unigene UN38899
| FASTA Sequence |
| Unigene ID: UN38899 | Length: 928 |
SSR | | AAAAGTAATTTCATGATCATGAAAGGAGTCATAACAAAAGCATAAATCAACTCTGGTCCTCCTGAGAAGGAACACTAACATAGCAA
AAGCTACTTAGTACCTAAAGGGGTAGTGATGGTGGTGGTGGTGGTTCACTAATCTCCCAGAAGGGCATTCATAGGCAATGTGTCCC
CTTCCACCACAGTTTCGACATATCATCAGCCTAGCCCTGCAGTCTCTACTCATATGACCCACTTGCCGGCAGTTCCTGCAAACCAC
CTCCTCCTCCCTGATATGGGATCTGATCCCTCGTGGTAACACATGGGTTTTAGGGCATTTGATAGCAAGGTGACCAGACAGGTTAC
AGTGATTGCACACGGGATCGTCTCTGCAGTCACGAGCAAAATGACCGGTCTTCCTGCAGTTGTTGCAGGCTTTCTCGTTAGTGCAG
TCAGCAGAGAAGTGACCTTGCTTGTAACAGTTGTTGCAGAGTCTGAGGTCTCCAGGAGGGAGGTGGCGACCTGTGCAGTCTTTAGC
TTGGTGTCCGGCAATACCGCAGCTGTGACAAATGCCTTCGTTGGTGCAGCTATTAGACATGTGACCTGGTTCACGGCAGTTCCAAC
ACAGCGACTTCGCGGAGCATTCTGATAAAATGTGCCCAGGAAGGCCACAGTTGTGGCGGATAGAGACATTGGGACACTCTCGAGCA
AAATGACCAGGTTGCTTACAATTCTTGCACATATTACTTTGGCTGAAAGTCCGACGAGAATCTCTCCGGTAAGGATCATCACGGTA
AGAAAAACGATCAGAACCAATCTTTCTGTCCATCGGATTCCTACTCCTCTCCAAACTCATTATCTCCTTCCTTCACGTCGACGACA
ACCAATATTTTGACGACAACCAATTTTCCGACAAGTAAACTATCAGCAGTTCGACAAATCTGGCGTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002512989 cellular nucleic acid binding protein, putative [Ricinus communis] | 998 | 4e-106 |
| CBI37994 unnamed protein product [Vitis vinifera] | 979 | 7e-104 |
| XP_002306137 predicted protein [Populus trichocarpa] | 978 | 9e-104 |
| XP_002267480 PREDICTED: hypothetical protein [Vitis vinifera] | 977 | 1e-103 |
| ADD09600 zinc knuckle (ccHc-type) family protein [Trifolium repens] | 977 | 1e-103 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RHD0 Cellular nucleic acid binding protein, putative | 998 | 3e-106 |
| B9H0X4 Predicted protein (Fragment) | 978 | 6e-104 |
| D3YBE9 Zinc knuckle (CcHc-type) family protein | 977 | 8e-104 |
| B9R835 Cellular nucleic acid binding protein, putative | 919 | 4e-097 |
| Q9AV38 Os10g0545300 protein | 861 | 2e-090 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G75560.1 zinc knuckle (CCHC-type) family protein | 784 | 1e-083 |
| AT1G75560.2 zinc knuckle (CCHC-type) family protein | 784 | 1e-083 |
| AT4G36020.1 CSDP1 (cold shock domain protein 1); RNA binding / double-stranded DNA binding / nucleic acid binding / single-stranded DNA binding | 155 | 9e-011 |
| AT3G43590.1 zinc knuckle (CCHC-type) family protein | 142 | 3e-009 |
| AT3G42860.1 zinc knuckle (CCHC-type) family protein | 112 | 9e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
