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Information for unigene UN38942

FASTA Sequence
Unigene ID: UN38942Length: 918  SNP
GGAAAAGGAAAGTAAAATTATAAATCTAACTGACAATATACCAGAAAAGTTAAAAAAGTTATAATAATTGAATTACATATATAGTA
ATATAATTTACTAAGAATACTTTCGTAATCAACCTGTTATAATTATCGTGAGCTTCACATGTATGGAACTAACTTCTCATATAGAG
ATTTAAAATACAAAATTTTTGTTTTTCAACATTATTTGAAGATTACAACATTCGTATTCTAGTTTCATCCGTATTGCAGGATTTTT
TACTTTTTTGATAGCCTCTCAGAAATCCGACTCGAAAGGTTTGTAAGTCTTGATTTTACTAACAATGCCAACTACTGATCCTGCTG
CCGCGGCTAAAGAGACAATAAGACAAACCAAACTCAAGACTTGAAGACTAACCCATCTTGTGCTCCAGCTCGGCAAATTCTTCTGT
GCAATGTACATTTCCACAGGGAAATAAACTGTTAGAGGCCAAAAACCAATGGCTCCCAAGAGACCAACAACATCGTTAAAGAAAGG
CATTAGCATTGAGATCGACGTTATTACAATCACAAAGACCGTCCTCCACACGAGCCTAAAGAGATTGAAATTGAAGGGCTTGGATC
CAGAAAAGAATGGAATCTCGGTCTCTTTTGTGACGAACTTACTCTCTGGAAACATCTTGGAAGCTTTTTTCTCGACAAAGGCAAAG
ATTGGTTGTGCATAGACTTGGTAAGCTCCGATTAGATGGATCAATATGGCGACATTGGCTATGTTAAGCAACCAATATGGGTCTGT
GAATCCTCCAGCAGCGAGGAGGTTTCCTGGTGCAGACTCTCCGAATGCTGCATACCCTATGCAGCCACAGAGCGTGTAGAAGAGGT
CGTCACTGCCACACTTACTAGAGCTGCTTTCTTCATCGTATTTCTTCAGAAGGGGTGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAH59425 amino acid permease [Plantago major]7172e-073
NP_001045010 Os01g0882800 [Oryza sativa Japonica Group]6769e-069
NP_196484 amino acid permease 2 [Arabidopsis thaliana]6633e-067
XP_002871360 hypothetical protein ARALYDRAFT_487723 [Arabidopsis lyrata subsp. lyrata]6633e-067
CAF22024 amino acid permease [Brassica napus]6615e-067

Swiss-Prot top hits (Blast detail)Scoree value
Q8GUM3 Amino acid permease 58073e-085
Q39134 Amino acid permease 37454e-078
Q38967 Amino acid permease 26631e-068
Q9FN04 Amino acid permease 46576e-068
Q42400 Amino acid permease 16362e-065

TrEMBL top hits (Blast detail)Scoree value
A5B880 Putative uncharacterized protein7626e-079
B9S2V3 Amino acid transporter, putative7474e-077
Q9ZRS1 Amino acid carrier7412e-076
O82044 Amino acid carrier7331e-075
B9GU09 Amino acid permease7251e-074

Arabidopsis top hits (Blast detail)Scoree value
AT1G44100.1 AAP5; amino acid transmembrane transporter/ basic amino acid transmembrane transporter8082e-086
AT1G77380.1 AAP3; amino acid transmembrane transporter7463e-079
AT5G09220.1 AAP2 (AMINO ACID PERMEASE 2); amino acid transmembrane transporter6649e-070
AT5G63850.1 AAP4; acidic amino acid transmembrane transporter/ amino acid transmembrane transporter/ neutral amino acid transmembrane transporter/ primary active transmembrane transporter6584e-069
AT1G58360.1 AAP1 (AMINO ACID PERMEASE 1); amino acid transmembrane transporter/ neutral amino acid transmembrane transporter6362e-066

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  33%
 
121  17%
 
81  17%
 
92  33%

Unigene MembersMember information