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Information for unigene UN38951
| FASTA Sequence |
| Unigene ID: UN38951 | Length: 971 |
SSR | | GGGTCCGCAGAATAAAACGAGAGGAGAGAGAAGGAAGTAAGAGATAAGGACAGGACCAAACGCGCACACACACACGGACACACACA
AAAGAAGCAAGAAAACTATTTTGATATAGAGAGAGAGGGAAGAGAGATGGAGAAGATGAAGTGTGAGCTATGCGACGGTGTGGCGT
GGATGTTCTGTGAATCAGACCAGGCGAGTTTATGCTGGGACTGCGACGGTTGCGTTCACGGAGCTAACTTTCTGGTGGCTAAACAC
GCGCGCTGCCTTCTTTGTAGTGTTTGCCAGTCTCCTACGCCTTGGAAAGCTTCGGGTCTTCGACTATGCCCAACAGTTTCCAACTG
CGAGCCTTGCCTTGCTCGTAAGAATAGTAACCGAGAAGACGACGGCGCAGAATCTTATGATGAGGATGAGGAGGAAGAAGAAGAAG
AAAGTGATGATGAGGAAGAGGAAGGGGAGAATCAGGTGGTACCGTGGGATGAGGCTGCGGCGGTGCAAGAACCTCCGGTGATGAGT
TCGTGGTGTTCCGTTAGCACCGGAGGAGAGGAACGTTTCAGTTTGGTAGAGAAAAGGACGCGACAAGATTCAGATCTTAACTCCTC
TCATGATGAATCAAACGAGTCACGACCGTTGAAACGGCTAGCGAGAGATGAAACCTAGCCAAGATCAACGGCTATGATGAAATCAA
CCTTAAAAATCAAACGACTGTGATACACACCACCAACATAAAATAGAAATGTCAGCCGTTGATTTTTCTGCTTATTCAGATTAGAT
TAATCATCACTGTTCATTGCAAACAATTCATCTTTAGTTAATTGAGTTTAGCTCCCTTTATGGCTTAGTCGGCTTACTGTGTTTTC
TGAAACCAAATGTATTGGTTGAACCCTTTTTGCTTAGCTGCTTACGATTTCGTATTTTTTGGTTGTATTATTCACCTATCTATAAT
TATGTTGATTTTATTTGTTTAAGCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_200258 B-box type zinc finger-containing protein [Arabidopsis thaliana] | 563 | 1e-055 |
| BAA97520 unnamed protein product [Arabidopsis thaliana] | 546 | 1e-053 |
| XP_002866044 hypothetical protein ARALYDRAFT_495528 [Arabidopsis lyrata subsp. lyrata] | 525 | 3e-051 |
| XP_002869569 hypothetical protein ARALYDRAFT_913814 [Arabidopsis lyrata subsp. lyrata] | 470 | 7e-045 |
| CBI20403 unnamed protein product [Vitis vinifera] | 448 | 3e-042 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SK53 Zinc finger protein CONSTANS-LIKE 3 | 133 | 4e-007 |
| Q8WML3 Histone acetyltransferase MYST4 | 123 | 6e-006 |
| Q8WYB5 Histone acetyltransferase MYST4 | 122 | 7e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6NLH4 At5g54470 | 563 | 8e-056 |
| Q9LSQ8 Genomic DNA, chromosome 5, BAC clone:F24B18 | 546 | 8e-054 |
| O81834 Putative uncharacterized protein AT4g27310 | 354 | 1e-031 |
| Q8VYJ8 AT4g27310/M4I22_120 | 351 | 3e-031 |
| A5BE99 Putative uncharacterized protein | 347 | 9e-031 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G54470.1 zinc finger (B-box type) family protein | 563 | 5e-058 |
| AT4G27310.1 zinc finger (B-box type) family protein | 354 | 8e-034 |
| AT3G21890.1 zinc finger (B-box type) family protein | 166 | 5e-012 |
| AT4G15248.1 zinc ion binding | 137 | 1e-008 |
| AT2G24790.2 COL3 (CONSTANS-LIKE 3); protein binding / transcription factor/ zinc ion binding | 133 | 4e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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