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Information for unigene UN38959

FASTA Sequence
Unigene ID: UN38959Length: 1058  SNP
GGACCGAAAGCTCCACAAACTCCATTAAAAACAAAACAAGGCGGCGCAAAAGAAGAAGAGAAAGATGCAACCGGAGACTTCAGATC
AGATGTTGTATTCGTTCCTCACTGGAAACGAACTCTCCGGCGGAGGATTCTCCGTTTCAGGTGACTACATGTCGACTATGCAGAGC
TTGTGCGGGTCGTCTTCGTCGACGTCATCTTATTACCCACTAGCGATCTCCGGCATCGGAGAAACGGTTGCTCAAGACAGAGCTCT
TGCTGCGTTGAGGAATCACAAAGAAGCTGAGCGAAGAAGAAGAGAGAGGATTAATTCTCATCTCAATAAGCTCCGTAACGTCCTTT
CTTGTAACTCCAAGACCGATAAAGCCACACTGCTGGCCAAAGTGGTTCAACGAGTCAAAGAACTTAAACAACAAACCCTAGAGATC
TCCGACTCCGACCAAACCCTTCTACCCTCAGAGACTGACGAGATTAGCGTTCTACACTATGGAGACTACTCAGACGACGGTCATAT
AATCTTCAAAGCATCTTTATGCTGTGACGACAGATCAGATCTCATGCCTGACATCATGGAGATTCTTAAGTCTCTTCACATGAAGA
CACTTCGAGCTGAGATTTCAACTCTTGGTGGTCGGACTAGAAGTGTTCTTGTCGTAGCTGCCGACAAAGAGATGCATGGCGTCGAA
TCTGTTCATTTCTTACAGAACGCTCTCAAGTCGCTGCTCGAGCGGTCAAGCAAGTCTTTGATGGAACGTAGTTCTGGTGGTGGAGA
ACGGTCAAAACGTCGTCGTGCGCTGGATCACATCATAATGGTGTGAGATGATGAGAGTACACTTAAGGTCTTTTACATATAGGGTA
TGATCGATCATAATTAACTTGGTTATAGTTACCAAAGCCTTTTTTAGTGTTCCTACTTTATAATGTTTTATGGTTTTGGTTATAAG
AGTGTAAGCAAGTGTTGTAAGTAGGTTTGGTGTGTTAAATCTTTTTCTTTTCTTTTTCAAGAAGAAGAAAAAGATGATCTAAATAT
TTATATATAAAGAATATTTTTCATGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879910 basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata]11733e-126
NP_181646 transcription factor bHLH106 [Arabidopsis thaliana]11714e-126
AAL69455 At2g41130/T3K9.10 [Arabidopsis thaliana]11293e-121
XP_002878108 basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata]7172e-073
ADL36594 BHLH domain class transcription factor [Malus x domestica]7172e-073

Swiss-Prot top hits (Blast detail)Scoree value
O80674 Transcription factor bHLH10611712e-127
Q9LET0 Putative transcription factor bHLH1077008e-073
Q9S7Y1 Transcription factor bHLH304212e-040
Q9LS08 Transcription factor AIG13692e-034
Q9XEF0 Transcription factor bHLH512912e-025

TrEMBL top hits (Blast detail)Scoree value
B9RUA4 DNA binding protein, putative6911e-070
A9P9G7 Putative uncharacterized protein6571e-066
B9H8T8 Predicted protein6159e-062
B9IHP9 Predicted protein6078e-061
C0JP30 Putative basic helix-loop-helix protein BHLH245701e-056

Arabidopsis top hits (Blast detail)Scoree value
AT2G41130.1 basic helix-loop-helix (bHLH) family protein11721e-128
AT3G56770.1 basic helix-loop-helix (bHLH) family protein7015e-074
AT1G68810.1 basic helix-loop-helix (bHLH) family protein4212e-041
AT3G25710.1 BHLH32 (BASIC HELIX-LOOP-HELIX 32); DNA binding / transcription factor3692e-035
AT2G40200.1 basic helix-loop-helix (bHLH) family protein2912e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  29%
 
94  57%
 
211  14%

Unigene MembersMember information