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Information for unigene UN38973

FASTA Sequence
Unigene ID: UN38973Length: 951 SSR 
AGTGAAACTTGAAGATTAACTGAACAGAGCAAAATGGCTGTTCCTTATAGCAAAACATGTTACTTAAAAAAATTTCACAAACAAGA
TTGCATACTACAAACAATAACACAACCAACCTCTTCTCATCTAAGTTTCACACCCTCTTCTTCAGGATGTGCAATCAAGCATCCGG
TTCTTGATTAGAACGTGAACTCGAGGAGCCAGGTTTTGGAGCACCGTGCTTCCTGTTCTTCCTGATTCTAGCTTTCTTGGCTTTCA
TCCTGCGTTTCTTCTCAGCAGAGTCTACCCATGTGTAATCCGACGGTATGAGGAAAGGTCCACTTCATCATCCCTGAAACGGTTAC
TCTCGCAGTCACTTGACTGGCCTCCACCGCGTGTGCCTTTCATCCAGGACACCCATTACGAATTATCTGATGACTTTACATCATGA
AAAACGGGACTAGAAGGAGGCGTTGAGAATTCCTCAGATGGTTGGAGCTCTTCGAATTTAGTGAAAGTGACGAGAACACGGACTGT
TGGAATAATGGGGATTGCAATCTTAACAGGGAATGTCCCTGTTGGAAGTTTTGTGGTGAGAAGCTCTCTGAGTCTCCTCACTGCTT
TGACCTTATTGGCTAATATGTCAAGAAGAGGAAGAAGCTCTTCTGTCTTAAGAGGGAAATCAGGTGTTAACCACAACACAGGTCTT
AACCCTTTCTTGTACTCGCTTTCACTCTTTTTCTTCTTGGCACTGCCTTTGTTGTCCTTTGTGGTGTTATCAGATACTGTTGACGT
TCCCTGGCTTTTCCCTTTCCCCTCTTCTGGTGCCGACTTAGAGCCTTTCTTAAGCTTTGTTGTTGTTGTTGTTGTTGTTGTCACTA
GTGATATAAGATTTTTTTATGTTTTATTTTCTTTCGTAAACCACTAGGCTTTATTTTTTTCGTGTTTGAAATTTTATTTTTCTTAT
TGATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002325341 predicted protein [Populus trichocarpa]5665e-056
XP_002266715 PREDICTED: hypothetical protein [Vitis vinifera]5432e-053
XP_002521987 protein binding protein, putative [Ricinus communis]5291e-051
XP_002453012 hypothetical protein SORBIDRAFT_04g036710 [Sorghum bicolor]5262e-051
BAD19146 ankyrin repeat protein-like [Oryza sativa Japonica Group]5253e-051

Swiss-Prot top hits (Blast detail)Scoree value
Q7ZUV0 Ankyrin repeat domain-containing protein 13C1594e-010

TrEMBL top hits (Blast detail)Scoree value
B9IPB0 Predicted protein5664e-056
B9S7L8 Protein binding protein, putative5297e-052
C5XV80 Putative uncharacterized protein Sb04g0367105262e-051
A2XAU7 Putative uncharacterized protein5252e-051
A3ACI8 Putative uncharacterized protein5252e-051

Arabidopsis top hits (Blast detail)Scoree value
AT3G04470.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT1G04780.1); Has 842 Blast hits to 642 proteins in 95 species: Archae - 0; Bacteria - 6; Metazoa - 523; Fungi - 26; Plants - 165; Viruses - 4; Other Eukaryotes - 118 (source: NCBI BLink).5242e-053
AT3G24210.1 ankyrin repeat family protein4211e-041
AT1G04780.1 ankyrin repeat family protein4202e-041
AT1G62050.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT1G11740.1); Has 967 Blast hits to 722 proteins in 118 species: Archae - 0; Bacteria - 24; Metazoa - 556; Fungi - 45; Plants - 193; Viruses - 2; Other Eukaryotes - 147 (source: NCBI BLink).3484e-033
AT1G11740.1 ankyrin repeat family protein3394e-032

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
115  100%

Unigene MembersMember information