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Information for unigene UN38978
| FASTA Sequence |
| Unigene ID: UN38978 | Length: 1221 |
SSR | | GAATAAGATCAATCCAATTACTTGTACAGTATTATTGAGCTATCAATTTTTTCAATACATCGTTACAAATTTTCTCAAGACAAAAA
TCACTTAGAAAAGAGCTAAAGCGATCCACCTACCCTAAATAATATGAAAGAACATGTAAATGTCTCAGCAGAAAATAACAAAACAA
AAGAAAACGTTGAACTTCTTTCTTGAGGAACAAGCATTTCTTCTTATAGAAATGAGTTTGAAAAAATGAAGTAGACATTCTCGTAT
AAAAGACTTTTAGGGTTTCTCTGTTTTCTCCAATACAAACACATTCCCTTTTCCATCTCTCCCTACTTGTAAATCTTCGTCTAAAT
ATGAGATCTCAAATAGTCCTTCAGGGTTGAAGATTCCCAGCAGAAGATTCATGTTCTTCTTGAAAATATTCATCAACTGATCTGGC
ATGATTGTTGAGCTTTCATAAGTAATCTCAACACTCGTTTTAGATATGATCTTGAAGTTGGCGACGATTCTAAACTCGCCGTCGCG
TAGATTCAATCCACGGACATCGAATTTCAACACATGGACTGTTTTGCCCTGAGCAATGTCGATCTGTTGAAGAAGATCTCCGAGAG
AGACGAAGTCTCGAAGACCCAACTTGGTTCTTTTGGAGCCCAACACAGTGATTGTGCTGTAAATGAGTTTCCAGCAACCTCCGATC
TTGTCTAACTCCCCGGTCGGCTCCGGCGTCGGATTCCGACATTCTAATAGTTTCACCAGACGCTCGATCTCTGTTTTTTTATCCGA
TTTAACTCCGAAGACCCCTCTATTGATCCCTTGGAGAGCTTCGTAGAGCTCTTCTTTAATCTGTGGAACAGTAATATCTTCTTCTT
CTTCTTCTTCATCTACTTGTTGTTCGTTTGGGGAGGAAGCAGAGCTCTGTTCTGTGACTTTTCCGATGAACATGGGCCTGAGACGA
AACGGGTTGTCACTAAAACTCAGCGTTTTGCTATTGAAATCGCTGAAAGAGAGTAACATCTTCGCGTTTCCTGTTCTTCTTGGGAT
TGCTTCTCGTGAAGCTGCCATTGGTGGTGGTGGCTGGATAAGCTTACTCGACATTGCCAGATGTCACAAAGTCGGCAGCGAACCAA
ATGAAACTTGAGAACGAATAAGAAGAAGAAGGTAAGAGATTTTGATAGTTGGGGGAGAGTGAATTTTTTATGGGGAGGAGAATCGA
CAGTTTTGGTTCATTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001031862 putative plastid-lipid-associated protein 7 [Arabidopsis thaliana] | 1185 | 1e-127 |
| XP_002873425 structural molecule [Arabidopsis lyrata subsp. lyrata] | 1167 | 2e-125 |
| NP_196544 putative plastid-lipid-associated protein 7 [Arabidopsis thaliana] | 1070 | 3e-114 |
| BAB09403 unnamed protein product [Arabidopsis thaliana] | 876 | 9e-092 |
| XP_002522199 structural molecule, putative [Ricinus communis] | 711 | 1e-072 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5M755 Probable plastid-lipid-associated protein 7, chloroplastic | 1185 | 6e-129 |
| O81439 Probable plastid-lipid-associated protein 1, chloroplastic | 141 | 6e-008 |
| Q6K439 Probable plastid-lipid-associated protein 2, chloroplastic | 141 | 6e-008 |
| Q9ZP40 Plastoglobulin-1, chloroplastic | 140 | 8e-008 |
| O49629 Probable plastid-lipid-associated protein 2, chloroplastic | 139 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2V388 Putative uncharacterized protein At5g09820.1 | 1070 | 2e-114 |
| B9S880 Structural molecule, putative | 711 | 8e-073 |
| Q06Z48 Fibrillin 5 (Fragment) | 630 | 2e-063 |
| Q0JD85 Os04g0422000 protein | 619 | 4e-062 |
| Q01JZ6 H0525E10.12 protein | 612 | 2e-061 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G09820.2 plastid-lipid associated protein PAP / fibrillin family protein | 1186 | 4e-130 |
| AT5G09820.1 plastid-lipid associated protein PAP / fibrillin family protein | 1070 | 1e-116 |
| AT4G04020.1 FIB (FIBRILLIN); structural molecule | 141 | 6e-009 |
| AT4G22240.1 plastid-lipid associated protein PAP, putative | 139 | 1e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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