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Information for unigene UN38988

FASTA Sequence
Unigene ID: UN38988Length: 1310 SSR 
GGTTGGCTTGTTGGCAGCACTGAGACATCAAACATGGTTACTCTCTTTCACTCTTAAAATCAATTAACCCTAAAAATCCTTTTTTC
AGTATTAATCCTCAAAAGTTCCTCTCTCATCTCTCTATCTCCATTAAAGCATTTCACAAGCAAAAAGATCTGAGCTCTTAAATGAG
TTTAAGATCTTCTTCGGTTCCTCCTGCAAGAACTGGGTCTTACCTCGTGTACTTTCTCTAATCCGGCTTTAATCTTTATATTAAAC
TCCAAGAAGAAAAATGGATATGAGAAGCCATGAAATGATAGAGAGAAGAAGTGATGACAATGGCAACAACGGTGCTGATCACCACC
AGTCCAAGTCTTCCTCCAACTCCGCCGCCGCCGCTAAAACCAACGTGCGGTACCGGGAGTGTCTCAAGAACCACGCGGCGAGCGTC
GGCGGAAGCGTACACGACGGATGCGGCGAGTTCATGCCGAGCGGTGAAGAAGGAACGATAGAAGCTCTCAGATGCGCCGCTTGCGA
TTGCCACCGTAATTTTCACCGGAAAGAAGTCGACGGTGTTGGAAGCTCCGCTCATCACAACCGTCACCACCACCACCAGTACGGCG
GAGGAGGAGGAGGAGGAGGGAGAAGACCGCCGCCTTCGAACATGATTCTTAACCCGCTCATGCTTCCTCCGCCGCCGAATTACACA
CCGATGCACCACCACAAGTACGGAATGAGTTCTACTGGAGGAGGAGGAGGGATGGTGACGCCGATGAGCGTCGCTTACGGCGGAGG
AGGAGGAGCTGAGTCGTCAAGTGAAGATCTGAATATGTACGGACAGTCGAGCGGAGGTGGTTCGGCGGGGCAGATGGGGTTTTCGA
AGAAACGGTTTAGGACAAAGTTCCCGACGGAGCAGAAGGAGAGGATGATGGAGTTTGCGGAGAAGCTAGGGTGGAGGATGAACAAG
CAAGACGAAGAGGAGCTCAAGAGGTTCTGTAATGAGATCGGAGTTAAGAGACAAGTGTTCAAAGTGTGGATGCATAACAACAAGAA
CAATGCCAAGAAACCATCAACTCCAGGAACTCTCTAATGATGTAATGATTAAGTACTTAATCAAGTGATTATGTCAGAGTTTTTAT
CTTTTAATCTACTGTTGTTGTTTTTTTTAATGTTATCTAGGTTTTTGTAGCTAGCTACGATCTTTGGATCAATCAATGGATGTTTT
GATTGCGTAGTTAATGTTTTTTTTTAATTTGGTTTACTTTTTATTATTTTTCTGTGTTTTTGTCTTTTACCCGGATCGTACTTGTA
ATCAGCTTCTTTTACTTAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565106 homeobox protein 33 [Arabidopsis thaliana]10892e-116
XP_002887580 hypothetical protein ARALYDRAFT_895391 [Arabidopsis lyrata subsp. lyrata]10892e-116
BAJ34360 unnamed protein product [Thellungiella halophila]10821e-115
XP_002302028 predicted protein [Populus trichocarpa]6393e-064
XP_002327798 predicted protein [Populus trichocarpa]6072e-060

Swiss-Prot top hits (Blast detail)Scoree value
Q9SB61 ZF-HD homeobox protein At4g246602618e-022
Q9FKP8 ZF-HD homeobox protein At5g654102502e-020

TrEMBL top hits (Blast detail)Scoree value
Q9FRL5 At1g7524010891e-116
B9GRN0 Predicted protein6392e-064
B9MXN6 Predicted protein6071e-060
A5C2J0 Putative uncharacterized protein (Fragment)6015e-060
C5YTM1 Putative uncharacterized protein Sb08g0064904734e-045

Arabidopsis top hits (Blast detail)Scoree value
AT1G75240.1 AtHB33 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 33); DNA binding / transcription factor10923e-119
AT2G18350.1 AtHB24 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 24); DNA binding / transcription factor3361e-031
AT1G14440.1 AtHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31); DNA binding / transcription factor2805e-025
AT1G14440.2 AtHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31); DNA binding / transcription factor2805e-025
AT4G24660.1 ATHB22 (HOMEOBOX PROTEIN 22); DNA binding / transcription factor2617e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  20%
 
122  40%
 
102  40%

Unigene MembersMember information