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Information for unigene UN38994

FASTA Sequence
Unigene ID: UN38994Length: 1559 SSR 
GGGCTTTGTAGCTGTTGTAAAAAAGATCACGATCGCAACTTGTGTGAGAGATATTGAGAGATTCAGATATGGCTTGGTTAGCTAGA
TCCATCGCGAACTCACTCAAGCTCGACGAGGACGACGACGATGTTGAGAAGCCACGGCCTAGCGGTGAGTCATCCGTTCAGAATCG
ATCGGTGTCGGAGTCACAGTCTCCTCGAGGAGTTAAGGAAGACATCTCGGAGCTAACCAAGACCTTGAGAAGCCAATTCTGGGGCG
TAGCTTCGTTCCTCTCGCAACCGTCTCCATCTCCGGATCTCCAGGAGGAGAGGAATCATCAGAGTCCAGATCATTCGGAGGAGGAG
GACGAGGATCTGATCGCCGGGATTAGGAACGATTTCGCGGAGATCGGAGGGAGGTTCAGGACTGGGATTTCGAAGCTCTCCGAGAA
CTTAGCGTCCAATTTCTTACAGTTGGGCTCGGAAGGAGTGGATCCGAAGGGTTATGATGACGTAATCGGAGTGACCGATGAGGTAG
TTGCGTTTGTGAGGGATCTCGCGATGAATCCTGATACTTGGTTGGATCTTCCTTTACCTGATGATGATGATACCTTTGATGAGTTT
GAAATGAGTGATGATCAGCACGAGCATGCTGTGGCTGTTGAAAGGCTTGTACCGAGCCTTGCTTCTTTGAGGATTGAGCTTTGCCC
TGAGTACATGAGTGAGAATTGCTTCTGGATGATTTACTTTGTGCTTTTGCATCCTAAACTCACCCAACACGATGCCTTACTTCTCT
CCACTCCTCAGGTACTCGAAGCAAGAGCAATGTTATCTCACGAGTTACACAAATCAAACAGAGCACCTGTGGAAGCAGCAGAGAGT
TCTGGAGCTAATGCTGCAGTGGTTGAACCTCTTGCCGTGCCTTATAACCCTTCGCAGGAGTCGTTAGTTGCTAAAACCGTGAATCC
ACAGGAGATTGAGACAGACAAGCACCCAATTGAGAGCAAGGAGGAGATACAAGTCGTTGACAAATCTGTCATTGAAGAAAGAAACT
CGTCGACTGATTCTTCTTCTTCGTCTAGATTTGTCTATGTGCAAGCTGAGGACGTAGAAGAAGAAGAAGACGCAGATGATTGGTTG
AACGATGAAGAGAGTTCAGATGCGGTGAGCGGCATGGAAGGAGGAGTAACTACCAACATCCTATTGGTGAAGACGAAGAAGATGTG
TCATTCAGTGATCTAGAAGATGATGATGACGAGGAAAGAGACGTACCCGTGAGTTCTAAGAGATCTACCAACTCTAGTTCACCAGA
CTGGGTACAGATATAAGACAGCAACGCAGGTCAGGTAAAAAGAGAACAAAAGAATCAAACCATTGTCTTGATGTCGAGGAAATGTA
ATACAAATGACCACCTCTAGTGTTCTTTTGGTTATATAAACATAAAATCTCTCAAGTCTATCAAAAATCTGTTCGATGAAAACTCA
TACGAGGGCTTTATTAGAAACTCCAAAATGTTTGTATATAAGGCAGAATTGGTTTATCATTGAGATTGCAAATTAATAAGAAATTG
ATCTTTAGATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_569021 BSD domain-containing protein [Arabidopsis thaliana]12542e-135
XP_002267363 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]7919e-082
XP_002310888 predicted protein [Populus trichocarpa]7765e-080
XP_002525300 conserved hypothetical protein [Ricinus communis]7433e-076
XP_002320007 predicted protein [Populus trichocarpa]7173e-073

Swiss-Prot top hits (Blast detail)Scoree value
Q75JC9 Uncharacterized protein DDB_G02716701614e-010

TrEMBL top hits (Blast detail)Scoree value
Q9FHP0 Genomic DNA, chromosome 5, TAC clone:K14B2012541e-135
B9HFZ2 Predicted protein (Fragment)7763e-080
B9SH31 Putative uncharacterized protein7432e-076
B9IBL7 Predicted protein7172e-073
B4G1A9 Putative uncharacterized protein6671e-067

Arabidopsis top hits (Blast detail)Scoree value
AT5G65910.1 BSD domain-containing protein12547e-138
AT3G49800.1 BSD domain-containing protein8854e-095
AT1G10720.1 BSD domain-containing protein4007e-039
AT1G69030.1 INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT1G26300.1); Has 173 Blast hits to 173 proteins in 34 species: Archae - 4; Bacteria - 4; Metazoa - 52; Fungi - 10; Plants - 92; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).1175e-006
AT1G26300.1 BSD domain-containing protein1158e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  50%
 
113  50%

Unigene MembersMember information