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Information for unigene UN38999

FASTA Sequence
Unigene ID: UN38999Length: 1176 SSR 
GGTGTCTACATAGCAACAAATATTTGGGCCGGGGGAATAAAATCGTAACAAATGGTATTTACACGCAGACATGAATGTTCAAACCG
TTAAAAAAGTACGCAGCAGGCACGTGGATACAGCTTTGGCACAGCAAACAAACAACAAACTATGATATGTTGGCTTTGTTCATTAG
CAGCTGAACTGATCTCGCTTTGTCCGGACAAGTTCCAGCGGTAATCTTTCCAATGCCATCCATAGTCTTGGAGCCGTTGGGTCAGA
TTTCGGTTGTGCTTTGGCTAGCTTCGACTTGAAACTGATGGTGATGCAGACCTTGAACTCAACTGAAAAGGGACCAGCGAAAATGG
ATGGACACATCAAAAGCCGAGGAAGTAGAACGTAAATTGGTAGTGTCATCTTACGGCAGACATCTCCATCTGCAATCTGTGTAGAC
TGAATCAAAGAGGTCTCAGTAACAATTCTCTCCCCCACAATGATCGACTCAACGCGGAGAAGGTGAATGTCGATAGAAGTAATAGG
AACTGAAGATGCTTCCACCGTTAGCTCGCCGCTAAGTGGATCCTGCAAAGAGCATTGAGTTGCTAATTTACCAGTAACCCGGAAAC
CACCTGTCTTAATATCGGGAAGTAAAGGATGTCTCTGAGTGTCTTGAGTGATGTAGAAGATAACCATTTCTGGAGGAAGTGGCCTC
TCAGGAAGATCAACTCTACCGCTCTCGATTATAAACTCAACTGTTGCAGATAAAGGTTTGTGCAAGTATCCTCGCGGTATATCTGC
AGTAAGTAGGTATTGGATGTTGATATTAGTTCCATGAAACGTCTCATAGAACTTTTCTGCAATGCTTTCTGCAGGCTCCCTCAGAT
TCACGGAGAAAGGAATCTCTGTAGTTCCAGGAGGGATCCTCCCAGAAGATCTGACCTCGATCGTCTTCTTTAGTATCTGAATGGGT
TTGATGACGCCATAGAAAGACTCTATAACTCCAGCTGATCCTCCACGTACCTGCAGATTGACTGATCCATTTACGGATAAACGTAT
CGCTTGGTGAGAAATCGAATTGGGAGATTTTATCACGATCTTTCCTTCCACTGCCTCTGAAGAGCGATAGATACGATTTGACCGAG
AAAGCTTGACGGTCACCGTCGTCGTCGTCGTCATTGGAATCAATCACCCAACTGAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175288 Vacuolar protein sorting-associated protein 26 [Arabidopsis thaliana]15774e-173
BAC42331 unknown protein [Arabidopsis thaliana]15757e-173
XP_002894117 vacuolar protein sorting-associated protein 26 family protein [Arabidopsis lyrata subsp. lyrata]15757e-173
NP_001185172 Vacuolar protein sorting-associated protein 26 [Arabidopsis thaliana]15353e-168
XP_002321517 predicted protein [Populus trichocarpa]12182e-131

Swiss-Prot top hits (Blast detail)Scoree value
O35075 Down syndrome critical region protein 3 homolog5413e-054
O14972 Down syndrome critical region protein 35377e-054
Q5RF33 Down syndrome critical region protein 3 homolog5323e-053
Q54DI8 Down syndrome critical region protein 3 homolog4472e-043

TrEMBL top hits (Blast detail)Scoree value
Q8GYE9 Putative uncharacterized protein At1g48550/T1N15_1515755e-173
B9IED2 Predicted protein12181e-131
Q9LP69 T1N15.1711661e-125
B9SWV7 Down syndrome critical region protein, putative9402e-099
A9RQY0 Predicted protein7862e-081

Arabidopsis top hits (Blast detail)Scoree value
AT1G48550.1 vacuolar protein sorting-associated protein 26 family protein / VPS26 family protein15781e-175

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  33%
 
104  67%

Unigene MembersMember information