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Information for unigene UN39089
| FASTA Sequence |
| Unigene ID: UN39089 | Length: 561 |
| SNP | GGGAAGGGACTTATCTACGAAGCAAATAAGCGATAATGGCGGATCAACAAGGAGGAACAGTTTTGGGAGGAGTTCGCGATGTCGAT
CCAAATGCAAACGATCTTCAAGTGGAGAGTCTAGCTCGTTTCGCTGTGGATGAGCACAACAAGAAGGAGAACGTGAGTCTGGAGTA
CAAGAGGCTCATCGGTGCGAAAACGCAGGTTGTGGCAGGAACGATGCACCATCTGACTGTGGAGGTGGCTGATGGTGAAAAGAAGA
AGGTCTACGAGGCCAAGGTTTTGGAGAAGGCCTGGGAGAATCTCAAGAAGTTGGAGTCCTTCAACCACCTTCACGATGTTTAGTTT
TCATACCTGAGATTGTCTATTAAACACATCGCATTCTACGTGATAATTAAGAGTCCCGGTTTAACCAATGGGTTAACTCGTTAAAA
TAATAAGTGAATGCGAAATTCTACTCCATGTGTTTGATTTGATGGGTAATGTGTAATGGAACTAGTATGGTGTTTATCTATTATGA
CTTTCGTTCTATGTATTTATTGCAAGTTGCAAACTTTTTTACTTT
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| GenBank top hits (Blast detail) | Score | e value |
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| AAQ03209 phytocystatin [Brassica rapa subsp. pekinensis] | 491 | 8e-048 |
| XP_002873551 ATCYS1 [Arabidopsis lyrata subsp. lyrata] | 488 | 2e-047 |
| ADK13075 phytocystatin 1-2 [Brassica rapa subsp. pekinensis] | 477 | 4e-046 |
| NP_196775 cysteine proteinase inhibitor 1 [Arabidopsis thaliana] | 471 | 2e-045 |
| AAL06476 AT5g12140/MXC9_10 [Arabidopsis thaliana] | 464 | 1e-044 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q945Q1 Cysteine proteinase inhibitor 1 | 471 | 9e-047 |
| P31726 Cystatin-1 | 298 | 1e-026 |
| Q06445 Cysteine proteinase inhibitor | 278 | 2e-024 |
| Q8H0X6 Cysteine proteinase inhibitor 6 | 277 | 3e-024 |
| Q0JNR2 Cysteine proteinase inhibitor 12 | 267 | 4e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q71QE1 Phytocystatin | 491 | 6e-048 |
| Q42380 Cysteine proteinase inhibitor (Fragment) | 417 | 2e-039 |
| Q30KV7 Cysteine proteinase inhibitor | 310 | 6e-027 |
| P93627 Cysteine proteinase inhibitor | 309 | 8e-027 |
| Q30KW0 Cysteine proteinase inhibitor | 309 | 8e-027 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G12140.1 ATCYS1 (A. thaliana cystatin-1); cysteine-type endopeptidase inhibitor | 472 | 7e-048 |
| AT3G12490.2 cysteine protease inhibitor, putative / cystatin, putative | 277 | 3e-025 |
| AT3G12490.1 cysteine protease inhibitor, putative / cystatin, putative | 277 | 3e-025 |
| AT2G40880.1 ATCYSA (CYSTATIN A); cysteine-type endopeptidase inhibitor | 250 | 4e-022 |
| AT5G05110.1 cysteine protease inhibitor, putative / cystatin, putative | 195 | 1e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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