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Information for unigene UN39091
| FASTA Sequence |
| Unigene ID: UN39091 | Length: 1495 |
| SNP | GGACGAATCCAATTAATCATTCAAATCGAAGAAACAGAGAAGAGAAGTTGAATCAAAATGGCTGGGAGAGCTTCGATCCCTGCTCG
CAACTCTGCCCTCATCGCTATGATCGCCGATGAGGACACCGTAGTTGGATTCTTGATGGCTGGAGTTGGTAATGTTGACATCAGGA
GGAAGACTAACTACCTCATCGTGGATTCAAAGACAACTGTGAGACAAATTGAGGATGCTTTCAAGGAATTCTCATCGAGAGATGAT
ATTGCTATCATCCTCATCAGCCAATACGTTGCCAATATGATCCGTTTCTTGGTGGATAGCTACAACAAGCCAGTGCCTGCGATTCT
GGAGATCCCTTCCAAGGACCATCCCTATGATCCTGCTCATGATTCGGTTCTCTCCCGTGTCAAGTACCTCTTCTCTGCTGAATCTG
TGTCACAGCGTTAAACATAGCTCTCGCTGAACCTATATCATTTGTTTGTTTTTGACATTCTTGTATTTCTCCTTTCAAACTCAAAA
ACTTTCAATAAATGTAAAACTCTTGATTTTTATTCGGAGATGATTGTTATATTATTGAGAATCAATGGTAGCACCATCCGGTTCCT
TTTTCATTGAAATAATAGAAGATTGCCATTGGTGTTTGTATTCAAGAGTCAAGGGCAGACTTTAAAGACTTAGTGAAGACTTCAAG
CTCCTTAAGTCCTTGCTCAGGTGACTCAGCCTCTCCCAATATCTTTACCATTGCGCTTCCTACAATGACTCCATCTGCTCCCCACT
CAGCTACCTGTTTCACATGCTCAGGTTTCGATATGCCAAATCCAACAGCGACTGGCTTGCTTGTAGCCTCTTTGATCTGTTGTAGA
AGAGACTGAACGTGTTCGTTAACAGACTCTCTCGTACCAGTTACTCCTACCGAACTTACAAGATAGATGAATCCTTGGGATGCTTC
AACGATGGCATTCATTCGTTCTTTGGGAGTTGTGGGTGTTGTGAGCAGTACAAGTTCAATCTGATGCTTTTTAGCTTCCTTCCGCA
GAGTCTCAGACTCTTCGAGTGGAACATCAGGTACAAGAAGCCCATGAACTCCAGCATCCTTAATGATAGTCATGTAGTTCTCGATT
CCTCGCCTTAAGATCGGGTTGTAATACGTAAACAATGCAATAGGACAAGATAACTGCGGTATAACCTCTTTAAGCATGGAGATAAT
GGAGTTAAAGTTGGTTCCTTTAAGCAAAGAACGTCTCGCAGCAGCCTGGATTGCTGGACCATCAGCTAAAGGATCAGAGTAAGGAA
CACCGAGTTCGATAATGTCGGAGCCACAAGAGTCGAGGACTTTGAGAGCTTTAGCTGTTGTGGAAAGATCTGGATCACCAGCTGTG
ATATATGGAATCAGAGCCACTTTGCGTTGCGACTTTAACCTAGCGAAAGTCTCTGATAGACCCACTGTTGTTGTGGGAGGGTTGTT
GAGAAGATCCATTGCGATTTTCCGAAGATCCCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_192170 tryptophan synthase alpha chain [Arabidopsis thaliana] | 1279 | 2e-138 |
| XP_002874906 hypothetical protein ARALYDRAFT_911953 [Arabidopsis lyrata subsp. lyrata] | 1272 | 1e-137 |
| CAN60260 hypothetical protein VITISV_007742 [Vitis vinifera] | 1093 | 8e-117 |
| XP_002281599 PREDICTED: hypothetical protein [Vitis vinifera] | 1087 | 4e-116 |
| ACU17605 unknown [Glycine max] | 1087 | 4e-116 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| B7JUK2 Tryptophan synthase alpha chain | 772 | 6e-081 |
| B8HPH2 Tryptophan synthase alpha chain | 762 | 8e-080 |
| Q10W95 Tryptophan synthase alpha chain | 752 | 1e-078 |
| B0C6F8 Tryptophan synthase alpha chain | 742 | 2e-077 |
| B1WNQ1 Tryptophan synthase alpha chain | 738 | 5e-077 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O22765 Putative tryptophan synthase alpha 1 | 1279 | 1e-138 |
| A5AI98 Putative uncharacterized protein | 1093 | 5e-117 |
| C6T703 Putative uncharacterized protein | 1087 | 3e-116 |
| B9H8G5 Predicted protein | 1080 | 2e-115 |
| B9S4R8 Trytophan synthase alpha subunit, putative | 1077 | 4e-115 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G02610.1 tryptophan synthase, alpha subunit, putative | 1280 | 6e-141 |
| AT3G54640.1 TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN); tryptophan synthase | 1023 | 4e-111 |
| AT4G02620.1 vacuolar ATPase subunit F family protein | 626 | 4e-065 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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