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Information for unigene UN39098

FASTA Sequence
Unigene ID: UN39098Length: 747  SNP
GGAGATTCGTCCAGGCACACGCCAAAACACAAAAACAAAACCTTCAAGAACAGATCAGTTTAATATTCATATATAAACAAAAGAAA
ACAAATGGATGTTGGTTTAATACAAGATCTGCCCATGTTGAATTTCTCAACACCGATCAAGATCCGATCCAACAACACCAACATAG
ATGATGACGGCAACGGCGGCGGCTGCACCACTCCTACTTCCTCACATCACAAGATTCCTCCCTCAACCGCCACTACTCCTCCTCCT
CCGCCGCAGAAACGGCGCCCACCTCCCACGCCGTCTTCTCTTGTCAGATCTTGCAAGAGGAAGCTTATGACGTCATCCAAGTTTGA
GATTATTGTCAACAAAGATGAGATCGATCGCTTCTTCTCTTCTGTTTATAACCAGAAGATGACGTCATCCCCCTCAACAACCACTA
CCACTACGACGGCTCTCACGGTGGCCAAGAGGCGTAGAAGTTTCCGTTCTTGTTCCCGAAAATGATCAATAGTTGCCTAGTTGGAA
TTAACCACAATCATGTTAAAGGTTCTTTCATTTAGATAGCTTTTTCCTATTTTATTTAATTTTATGCATGTTATGATTCTCGACTT
TAAACGTCGACCCACTGTATATGTACATGTGCGAACGGTAGATGGTATCTTTTTCCTAATAATTTCATTTGAATTATGAAATTTCT
CAATAATGTAGTTTTGCAAGCCTTTTGTAAACAAATGAAAAAATAATTGAATATTTCAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873151 hypothetical protein ARALYDRAFT_487228 [Arabidopsis lyrata subsp. lyrata]5029e-049
NP_196067 cyclin-dependent protein kinase inhibitor [Arabidopsis thaliana]4794e-046
AAM63322 unknown [Arabidopsis thaliana]2886e-024
XP_002884796 hypothetical protein ARALYDRAFT_478386 [Arabidopsis lyrata subsp. lyrata]2886e-024
BAC42937 unknown protein [Arabidopsis thaliana]2878e-024

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LZ78 At5g044704954e-048
Q8LDA2 Putative uncharacterized protein2884e-024
Q8GXB8 Putative uncharacterized protein At3g10525/F13M14.312875e-024
Q9LPP4 At3g105252875e-024
Q0WTW6 Putative uncharacterized protein2832e-023

Arabidopsis top hits (Blast detail)Scoree value
AT5G04470.1 SIM (SIAMESE); cyclin-dependent protein kinase inhibitor4962e-050
AT3G10525.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SIM (SIAMESE); cyclin-dependent protein kinase inhibitor (TAIR:AT5G04470.1); Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).2873e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  36%
 
113  27%
 
62  18%
 
201  9%
 
181  9%

Unigene MembersMember information