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Information for unigene UN39108

FASTA Sequence
Unigene ID: UN39108Length: 628 SSR 
GGGATCTCTCTCTCTCTCATTTCGCGTTTGTAACTCAGTGGAGAAGGAAATATCCAAATCGATCCGTTTAAAAAAAGGGATTTCGA
ATTTTTCCGAGCTATGTCGAGTGCGGTGGACGCGACGGGGAACCCGATCCCTACATCTGCAGTGTTGACTGCTTCGGCGAAGCATA
TAGGTTTAAGATGTATGTCTGAGAACGTCGCGTTCCTCAAATGCAAGAAGAACGATCCTAACCCCGAGAAGTGTCTCGACAAGGGT
CGTGACGTCACTCGCTGCGTCCTTGGCTTGCTGAAGGATCTACACCAGAAGTGCCAGAAGGAGATGGATGACTATGTTGGGTGTAT
GTATTACTACACGAACGAGTTTGATCTGTGTAGGAAAGAGCAAGAAGCCTTCGAGAAAGTGTGTCCCCTGAAGTGAGAAGAATCAC
AGGCTATTCTCATGTTTTTTTAATTTGTAATCTCTTAATAAAGCAAAATGTTCATTTTTGAATGAGCTTTACTCTCTCTACTACTT
TTTTTGTTGTCATCACCATTTATTTTTTCCTCTCAAATGTTTTCAAAGACAAGGAAATGACTCTCACTGTTTGAAGGTGCTTTAAT
CAGCGCAGAATGAATTTCCGGATAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197381 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 8 [Arabidopsis thaliana]5691e-056
NP_566280 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 8 [Arabidopsis thaliana]5261e-051
XP_002884571 NADH-ubiquinone oxidoreductase 19 kDa subunit family protein [Arabidopsis lyrata subsp. lyrata]5223e-051
ACJ86197 unknown [Medicago truncatula]5044e-049
XP_002311809 predicted protein [Populus trichocarpa]4963e-048

Swiss-Prot top hits (Blast detail)Scoree value
Q0MQB0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 81564e-010
P51970 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 81564e-010
Q0MQB1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 81564e-010
P0CB91 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 81564e-010
P0CB92 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 81564e-010

TrEMBL top hits (Blast detail)Scoree value
Q8LGE7 At5g188005697e-057
Q9SQT4 F24P17.23 protein5267e-052
B7FN64 Putative uncharacterized protein5043e-049
A9PB99 Predicted protein4962e-048
C6T4D3 Putative uncharacterized protein4935e-048

Arabidopsis top hits (Blast detail)Scoree value
AT5G18800.1 NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family protein5704e-059
AT5G18800.2 NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family protein5704e-059
AT3G06310.1 NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family protein5274e-054
AT3G06310.2 NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family protein3025e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  67%
 
62  33%

Unigene MembersMember information