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Information for unigene UN39134

FASTA Sequence
Unigene ID: UN39134Length: 870  SNP
GGAAAACGCTCAGTATCTCCGGCTACTTGAAAACCAGACCTCGAGATCAAATTAGGGCACAAAGCCCTGTCGGAGACAGAAGCTAT
GGGGAGGAAGAAACTTGAAATCAAACGAATTGAGAACAAAAGTAGCCGACAAGTTACCTTCTCCAAACGACGCAACGGTCTCATCG
AGAAAGCTCGCCAGCTTTCCGTTCTCTGTGACGCATCCGTCGCTCTCCTTGTCGTCTCCGCCTCCGGAAAACTCTACAGCTTCTCC
TCCGGTGATAACCTGGTCAAGATCCTTGATCGCTATGGAAAGCAACATGACGATGATCTTAAAGCCTTGGAGCGTCAGTCAAATCC
TCTGAACTGTGGTTCACACCATGAGCTACTGGAACTTGTGGAAAGCAAGCTTGAGGAATCAAATGTCGATAATGTAAGTGTCGGTT
CCCTCGTTCAGCTGGAGGAACAACTTGAGAACGCCCTCTCCGTAACAAGAGCTAGGAAGACAGAACTAATGTTGAAGCTTGTCGAG
AACCTTAAAGAAAAGGAGAAATTGCTGGAAGAGGAGAACCATGTTTTGGCTAGCCAGATGGAGAAGAATAATCTTTTGAGAGCTGA
AGCTGATAATATGGAGGTGTCACCTGGACAAATCTCCGACATCAATCTTCCGGTAACTCTCCCACTGCTTAATTAGTCACCTTTAT
TAATTGGTGGATAAATAAAATCCAAAACATATAATTTTTAAAAAGAAGATGTGTAGTTATCCCCTTTTAAAGGGTGTACGTTGTAT
AATCTCAATACCCTCTCCGGCTGAGAGACTTTGGATGTAAAATTACTTGAGATTTAACTATGTAAAATAAAAAATCTATGTAAGAC
ACTTTGAAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABP96967 flowering locus C protein [Sinapis alba]9322e-098
AAK70215 MADS-box protein [Brassica napus]9285e-098
ABI29999 flowering locus C1 [Brassica rapa subsp. pekinensis]9187e-097
CAJ77613 flowering protein [Brassica oleracea var. alboglabra]9016e-095
ADK92387 FLC [Eutrema wasabi]8254e-086

Swiss-Prot top hits (Blast detail)Scoree value
Q9S7Q7 MADS-box protein FLOWERING LOCUS C7705e-081
Q9FPN7 Agamous-like MADS-box protein AGL315545e-056
A2YNI2 MADS-box transcription factor 183351e-030
Q0D4T4 MADS-box transcription factor 183351e-030
Q9SAR1 MADS-box transcription factor 83233e-029

TrEMBL top hits (Blast detail)Scoree value
A5A5W9 Flowering locus C protein9321e-098
Q8W005 MADS-box protein9283e-098
Q0GFF4 Flowering locus C19185e-097
Q1ELW3 Flowering protein9014e-095
Q1XA00 Flowering locus C8137e-085

Arabidopsis top hits (Blast detail)Scoree value
AT5G10140.1 FLC (FLOWERING LOCUS C); specific transcriptional repressor/ transcription factor7768e-083
AT5G10140.2 FLC (FLOWERING LOCUS C); specific transcriptional repressor/ transcription factor6872e-072
AT5G10140.3 FLC (FLOWERING LOCUS C); specific transcriptional repressor/ transcription factor6872e-072
AT1G77080.4 MAF1 (MADS AFFECTING FLOWERING 1); transcription factor6324e-066
AT1G77080.5 MAF1 (MADS AFFECTING FLOWERING 1); transcription factor5742e-059

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
95  56%
 
82  22%
 
181  11%
 
111  11%

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