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Information for unigene UN39153

FASTA Sequence
Unigene ID: UN39153Length: 1556 SSR 
GCTCGGAATCTCTAGAAACCTTCGGAGTCTAAAGTTTTTATTACTACATTCAACGCAATTAATCCAAGTAATTATATAAACTTCGA
AAACAATTTCATCTTCACATAATCTCTTAAACCCTTGACTTGTGAGGATATACGGCCGCAAGTGCATGCAATTTTTTAAGGTTTTA
ATCTTTTTATCTGCTCGCTTCATTCCCCTTGATCAATGTTTTCACAAATTATAACCCTCATTGCCCCTTAGTTTCAGTTTTATCCG
CAGCAACATGTCTTTTAGCTTTAGGAACTCCACTGACCGGAGCAAAACCACTGCTCATTATCCGCAAACAACTTGCAAGCTTCCTC
TCCACTAAAAAGATCTTCATGCTCTTCCATTTTCACAAACTGGCCAAAACATCCCATCGTGGACATTTCAACCGCTGTCGCAGCCG
CCGCCGCCGCCGTGGGACTATATTCTTCGTTCAAAACAGCGCTTGAGTCGCTACTATCGGCAGGATCTTCTCTGAAGCTTTCGGTA
CGTGGGAAAATGCTAAACATCTCGTATGCTAGCTCCGATGCCTGAGCTTCTGTAGGAATATGTGGCGGAGGACGCTGGCTTAGCTC
TAAGACTTCGTTATTAGCAATCGCCGTCTGATACGCGACCGTCTCCACCGCTTTTACAACGTCGGTTTCTTCTGTCACCGTGTTAC
CATTGTTTACGCCGGTCCCTTCCACGTCAAGTTTTGCTCTTAGCTCTTTAATCTCTGCAAGAAGGGAATCGTTATCACGTTGAAGT
GAGTCGCGGCTGCGTTTGAGTGAGTCAAAATTTGACTTGAGAACGCCGTAATCGCGTTCGAGCTGCTTTGTCTTCCACCGAGCACG
GCGGTTCTGAAACCATATCGCCACTTGTCGAGGTTGCAGCCCAAGCTCTTGAGCCAGCTTCACTTTCCTTTCAGGCTCTAACTTGT
TATCAATCTCGAAATTCTTTTCTAACGCTTTCACTTGCGTTACACTCAACCGCCGTTTTTTCTCCGTTGCCGCCGTAGACGACGCG
TGTCCCACGCCGATGTCTTCTAGACTTCCGTCTTCTTCTAGACCGTCGAACATCTGGGAGTAGTCTCCGGGGCCGGGATAGAGAAA
TCCGGTGGCTGTTGGTCGTGGACTTAGTTGTTTGTCTGATGTAGAGTGGCAAATTGGTAAGAAACCGGATAAAGAATCGGAGCTTC
CACGTGATCTCTTCATCTTGTTTGGTCGGTAACTATATATTGAGGTCAGGAACAACTTAAGAAGGTAGAACGTTTAGAGGGCCTAG
ATCGGATTGAGTAGTAACCTAACGAACGATGAGGATCTATCTACGACCAATACATATTGCTCGAAGATACGATCATCTCCCAAGGA
TTTTTGCGCTGTGTCTGCTATTATCCATGATTAGAGTTAACTAATTTTACGTATTCATCTAACACCTTCCAAGAAAAAAGTTACTC
TTAAATCATCGAATTTTCTTGATCGGGAAAATATATAAATTGGAATTTACAATAAAGAGGAAAAGAGAATAGAGAGTGGGAGAGAG
GGAGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_201334 homeobox-leucine zipper protein ATHB-5 [Arabidopsis thaliana]12202e-131
XP_002862344 hypothetical protein ARALYDRAFT_497511 [Arabidopsis lyrata subsp. lyrata]12067e-130
XP_002866664 hypothetical protein ARALYDRAFT_496765 [Arabidopsis lyrata subsp. lyrata]12067e-130
NP_001032151 homeobox-leucine zipper protein ATHB-5 [Arabidopsis thaliana]11271e-120
BAJ34333 unnamed protein product [Thellungiella halophila]7237e-074

Swiss-Prot top hits (Blast detail)Scoree value
P46667 Homeobox-leucine zipper protein ATHB-512207e-133
P46668 Homeobox-leucine zipper protein ATHB-65575e-056
Q940J1 Homeobox-leucine zipper protein ATHB-164544e-044
A2YWC0 Homeobox-leucine zipper protein HOX203981e-037
Q6Z248 Homeobox-leucine zipper protein HOX203981e-037

TrEMBL top hits (Blast detail)Scoree value
Q2V2V1 Putative uncharacterized protein At5g65310.211277e-121
Q69G85 Homeodomain-leucine zipper protein5561e-054
Q9M4Q1 Hb-6-like protein5424e-053
A9PHT9 Putative uncharacterized protein5211e-050
Q93XA5 Homeodomain leucine zipper protein HDZ1 (Fragment)5093e-049

Arabidopsis top hits (Blast detail)Scoree value
AT5G65310.1 ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5); protein homodimerization/ sequence-specific DNA binding / transcription activator/ transcription factor12743e-140
AT5G65310.2 ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5); protein homodimerization/ sequence-specific DNA binding / transcription activator/ transcription factor11776e-129
AT2G22430.1 ATHB6; DNA binding / protein binding / sequence-specific DNA binding / transcription activator/ transcription factor5574e-057
AT4G40060.1 ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16); sequence-specific DNA binding / transcription activator/ transcription factor4544e-045
AT1G69780.1 ATHB13; DNA binding / sequence-specific DNA binding / transcription factor3513e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
88  73%
 
112  18%
 
61  9%

Unigene MembersMember information