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Information for unigene UN39159
| FASTA Sequence |
| Unigene ID: UN39159 | Length: 1281 |
SSR | | TACTATTTCATCTCTCTCTCTCTCTCAATTCTCTGCATCATCCATGGAGACGGAGAATAGCGCCGGTTTCAGATACCTCGGCCACA
CTTTCAGCAACCTGAGTCTCAACGATCACTCCTCCTCCGCCTTCAGTGACTGTAACAGCGACAGATCCGGCGAATTCCCCACCGCA
TCTCCCCTCAGCCGACGCCTCCTCCTCTCCTCCGCCACCGACAACTCCGACGATCTCATCCCTCACCTCGTCGTCCTCCTCCTCTC
CTCCTCCATCGAGGACCAGAAGCAAGCCGCGATGGAGATCAGGCTCCTCTCCAAGCACAAACCTGAGAACCGCATCAAAATCGCCA
AAGCAGGCGCCATCAAGCCCCTCGTGTCTCTAATCTCCTCCTCCGATCCTCAGCTCCAGGAGTACGGCGTCACTGCCATCCTCAAC
CTCTCCCTCTGCGACGAGAACAAAGACCTCATCTCTTCCTCCGGCGCCATCAAGCCTCTCGTGAGGGCCTTGAAGACGGGAACTCC
CACGGCCAAGGAGAACGCCGCCTGCGCTCTCCTCCGTCTCTCGCAGACGGAAGAGAACAAAGCCGCGATCGGGAGATCGGGAGCGA
TCCCTCTCCTCGTGAGCCTTCTCGAGACGGGAGGGTTCAGGGCGAAGAAGGACGCGTCGACGGCTCTCTACTCGCTCTGCTCGGCC
AGAGAGAACAAGATCAGGGCCGTGGAGTGTGGGATCATGAAGCCGTTGGTGGAGCTGATGGCGGATTTCGGATCCAACATGGTCGA
CAAGTCGGCGTTCGTGATGAGTCTGCTGATGTCGGTGCCGGAGTCGAAGGCGGCGGTTGTGGAGGAAGGAGGGGTTCCGGTGCTGG
TGGAGATAGTTGAGGATGGGACGCAGAGGCAGAAGGAGATGGCTGTGGCGATACTGCTTCAGATTTGCGAGGAGAGCGTGGTGTAT
CGAACCATGGTCGCGAGGGAAGGAGCCATTCCTCCGCTTGTGGCGCTCACTCAGGCGGGAACAACCAGTCGAGCTAAGCACAAGGC
GGAGGCCTTGATTGAGCTATTAAGGCAACCTAGATCATCTTATTAGTAACCCCACTCCAACGGTGGATGTGATGATTGATCGTCGG
AGCTTGTGAGTTTTTTTTCTTTTTTTCTTTTTACTTTGTACAAACAAAACAACCGCAAATGGGAAATGAATAAAATAACTGTAAAT
TAGTGCTTGTTTTCCCTCTGTAATTTTATCTTCTTGAGATTGTTTGTTTTTGTGATCCAGTTGATAAATATCGGTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566136 armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] | 1406 | 3e-153 |
| AAM64910 unknown [Arabidopsis thaliana] | 1403 | 7e-153 |
| AAL16172 AT3g01400/T13O15_4 [Arabidopsis thaliana] | 1396 | 5e-152 |
| XP_002510099 E3 ubiquitin ligase PUB14, putative [Ricinus communis] | 1285 | 4e-139 |
| XP_002301150 predicted protein [Populus trichocarpa] | 1266 | 6e-137 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O22193 U-box domain-containing protein 4 | 596 | 1e-060 |
| Q5XEZ8 U-box domain-containing protein 2 | 590 | 6e-060 |
| Q8VZ40 U-box domain-containing protein 14 | 583 | 4e-059 |
| Q8GUG9 U-box domain-containing protein 11 | 563 | 8e-057 |
| Q8GWV5 U-box domain-containing protein 3 | 563 | 8e-057 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SGH8 T13O15.4 protein | 1406 | 2e-153 |
| Q8LB86 Putative uncharacterized protein | 1403 | 5e-153 |
| Q944I3 AT3g01400/T13O15_4 | 1396 | 3e-152 |
| B9R706 E3 ubiquitin ligase PUB14, putative | 1285 | 2e-139 |
| B9GNP8 Predicted protein | 1266 | 4e-137 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G01400.1 armadillo/beta-catenin repeat family protein | 1406 | 1e-155 |
| AT5G58680.1 armadillo/beta-catenin repeat family protein | 1262 | 6e-139 |
| AT4G16490.1 binding | 711 | 5e-075 |
| AT2G23140.1 binding / ubiquitin-protein ligase | 618 | 3e-064 |
| AT5G67340.1 armadillo/beta-catenin repeat family protein / U-box domain-containing protein | 590 | 5e-061 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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