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Information for unigene UN39165
| FASTA Sequence |
| Unigene ID: UN39165 | Length: 1188 |
SSR | | AAGACTCTCTCTCTCGAGACAGAGACAAGAATGGCACCTTCGTCGTCGAGCGGTCTGACCTTCAAGCTCCACCCTCTGGTAATCGT
CAACATATCCGATCACTACACCAGGGTCAAGACTCAGCTCAACCCTCCGCCAGGTTCAGTCTGCTCAACCGAGAACAAGGCATCCT
CCAACAACAACAACAACGGCGAAGCAATGAACCCTAGGGTTTACGGATGCGTGATCGGCGTCCAGAGAGGCCGCACTGTCGAGATC
TTCAACAGCTTCGAGCTTTTGTTCGATCCTTCCACTGAAACCCTCGATAGATCCTTCCTCGAGAAGAAGCAAGAGCTCTACAAGAA
AGTGTTCCCTGACTTCTACATTTTGGGATGGTACTCTACGGGGAGTGACGCTGAGGAGTCTGATATGCTTATCCACAAAGCCTTGA
TGGATATCAATGAGTCTCCTGTTTATGTGCTTCTTAACCCGGCAATCAATCACGCACAGAAGGACCTCCCAGTTACTATTTACGAA
AGTGAGTTGCATGTCATTGATGGGATCCCACAGCTTATCTTTGCTCATACAAGCTACACAATCGAGACGGTTGAAGCTGAACGGAT
ATCAGTCGACCATGTTGCGCATCTCAAACCTTCTGATGGTGGCTCAGCAGCAACCCAGTTGGCTGCTCAGCTTACTGGGATACATA
GTGCCATCAAAATGCTTAATAGCAGAATCAGAGTGCTCCACCAGTATCTTGCCGCAATGCAGAAAGGTGATATTCCTTGTGAAAAC
TCACTTCTGAGACAAGTATCAAGCCTGCTAAGAAGGTTGCCCGCCATGGAATCAGAGAGGTTTCAAGATAACTTTTTGATGGAGTA
CAATGACAAATTACTAGTAACTTACCTAGCAATGATTACAAATTGTACCAGCACCATGAATGAGATGGTGGACAAATTCAATACTG
CGTATGACAGAAACACTCGAAGAGGTGGAAGAACTGCGTTCATGTAAAAGTTTCTTTCCAGCAGATTCAAGCTTCTCTTCAATTCC
TGAAAACTTTTTTTTGCATTTGCCTTGGTGATAATATCTATAAATGAGTCTCTGTCTCCATCGTGATTGTTTCTATCTATGTAAGA
AGCTTCTCTGTACTAAATACTCTTGTTTGATTTTTTCCATTGTTGGTAAAAAAATATTACGATTGAAGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866135 hypothetical protein ARALYDRAFT_495718 [Arabidopsis lyrata subsp. lyrata] | 1471 | 9e-161 |
| NP_568839 COP9 signalosome complex subunit 6a [Arabidopsis thaliana] | 1465 | 4e-160 |
| AAL58106 CSN complex subunit 6A [Arabidopsis thaliana] | 1461 | 1e-159 |
| NP_567746 COP9 signalosome complex subunit 6b [Arabidopsis thaliana] | 1384 | 1e-150 |
| XP_002529210 signalosome subunit, putative [Ricinus communis] | 1371 | 3e-149 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8W206 COP9 signalosome complex subunit 6a | 1481 | 3e-163 |
| Q8W1P0 COP9 signalosome complex subunit 6b | 1400 | 6e-154 |
| Q54C92 COP9 signalosome complex subunit 6 | 564 | 5e-057 |
| Q6NUC2 COP9 signalosome complex subunit 6 | 535 | 1e-053 |
| Q07G98 COP9 signalosome complex subunit 6 | 534 | 2e-053 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q1EC57 At5g56280 | 1465 | 3e-160 |
| B9ST91 Signalosome subunit, putative | 1371 | 2e-149 |
| B6TWG6 COP9 signalosome complex subunit 6a | 1268 | 2e-137 |
| B9N5J2 Predicted protein | 1217 | 2e-131 |
| C5YJ86 Putative uncharacterized protein Sb07g028380 | 1160 | 7e-125 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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