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Information for unigene UN39173

FASTA Sequence
Unigene ID: UN39173Length: 522 SSRSNP
CATGTTTTACAAGACAGAAACAAACATATAACATTCAAGCATGATGATGATGATGATGATGATCATCACCCATTATTATATTAAAC
ACTAGTGAAAGAGGACAAGACCCACTTTTACTTGTAACTTAACACTCATAATCAGGTAAACTTGTCACTTATTAATCATGATTAAC
AGTTTGGGGAAGCAACCTTGCAATCGTTGGAGACTTTTTTTGCGTTTGGGGAGCTAACGTATTGGCGGAGGCTAGGGTTCCTCATG
TACCCACAAAGGCATGGCTTCTGCTCTCTCAGCTTGGCGCAGCACGACGCCGACGGTGACGAAGATGACATAAACGCCGCCAAACA
TGGAGACAGTTCCGTCACCGAGCAGGTCACTCCTTCGGCCACCGGAAGTTTTTCCACCGTCACGAGGAGAACCGCTGCCACGAGAG
CTAGAACGGAAACCCACATCACCTTCACCATTTTCCGGTTCTTGATTCTTTATGTTTGTGGTTGTTCTGTTTTTAGAAATCAGTAT
GCTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564532 bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana]3644e-033
NP_188456 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana]3053e-026
AAG60123 lipid transfer protein, putative [Arabidopsis thaliana]2892e-024
AAA33933 lipid transfer protein [Senecio odorus]2839e-024
Q43681 RecName: Full=Probable non-specific lipid-transfer protein AKCS9; Short=LTP; Flags: Precursor2758e-023

Swiss-Prot top hits (Blast detail)Scoree value
Q43681 Probable non-specific lipid-transfer protein AKCS92754e-024
P82353 Non-specific lipid-transfer protein 22388e-020
A2XBN5 Non-specific lipid-transfer protein 21733e-012
P20145 Probable non-specific lipid-transfer protein1715e-012
Q10ST8 Non-specific lipid-transfer protein 21706e-012

TrEMBL top hits (Blast detail)Scoree value
Q94AQ3 Putative lipid transfer protein3643e-033
Q42158 Lipid transfer protein3616e-033
Q9LJQ3 AT3g18280/MIE15_73052e-026
Q9C743 Lipid transfer protein, putative2891e-024
Q41378 Lipid transfer protein (Fragment)2836e-024

Arabidopsis top hits (Blast detail)Scoree value
AT1G48750.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein3794e-037
AT3G18280.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein3061e-028
AT1G66850.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein2299e-020
AT2G14846.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein2048e-017
AT1G73780.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein2012e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  20%
 
114  40%
 
92  20%
 
122  20%

Unigene MembersMember information