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Information for unigene UN39182
| FASTA Sequence |
| Unigene ID: UN39182 | Length: 885 |
SSR | | GGACGCTGCTTTAGCAATTTCACCACGCCATCTTCTTCTTCTTCTTCTTCGATTCCTTCAGCCAAAAGATGGCGAAGAGAGAGATG
GCTGTGTACTGTTTCGACACTTTGGTCTCTCACTACAACAACGATGACACTCCTCCACCTGCCTTTGACGACGCCAATCATCCATT
GTTTGTGACGTGGAAGAAAATAGTGAATGGTGGGGAGCCTCGATTGCGTGGATGTATTGGTACACTGGAAGCACGCCGCTTGATCA
GTGGCTTCAAGGATTATGCCTTGACCAGTGCCCTGAGGGATCGTAGGTTCCCACCAATACAGTCCAAAGAACTGCCCTTTCTGCAA
TGTACAGTATCTGTCCTGACCGATTATGAAACTGCAGAGGATTATCTTGATTGGGAGGTGGGAAAGCATGGTATAATCATTGAGTT
CACTGAACCTGTGACTAACACAAAGCGAAACGCCACATATTTGCCTGAGGTACCAGCTCATGAAGGCTGGACAAAGATAGAGGCAA
TAGATTCACTGGTGCGCAAAGCAGGATACAACGGTGAAATAACAGAATCAGTGCGTAGGAGAATCCATCTAACACGTTACCAGAGT
ACATTATTCAGCATGCATTATAGTGAATATCTTTCGTACGTGAAGGCCACGAGAGGCGGCGGTGTTGCCCCGGCTATTAACGGGAC
CAGCAAGCCCGCCATGGCCTTGTCTTGATTTGCACCATAAAGCTGCTGCTAATGGGTGCACCTCCTCCCTCATTTATCTTTGTATT
TGTGTTCTCTATGATTAAAAGAAGCTACTTCTTCAAGGAAACTCTCTATTTGGCTGCTTCACAATTGTATTACAACAATGTCATAA
AATCAAAGAAACCAACTTTGATCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002881612 AMMECR1 family [Arabidopsis lyrata subsp. lyrata] | 1005 | 6e-107 |
| NP_565894 AMMECR1 protein [Arabidopsis thaliana] | 999 | 3e-106 |
| CBI32198 unnamed protein product [Vitis vinifera] | 880 | 2e-092 |
| ABK92765 unknown [Populus trichocarpa] | 867 | 6e-091 |
| XP_002315428 predicted protein [Populus trichocarpa] | 867 | 6e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZVJ2 Uncharacterized protein At2g38710 | 999 | 1e-107 |
| Q9Y4X0 AMME syndrome candidate gene 1 protein | 481 | 2e-047 |
| Q9JHT5 AMME syndrome candidate gene 1 protein homolog | 481 | 2e-047 |
| Q5RAS7 AMME syndrome candidate gene 1 protein homolog | 481 | 2e-047 |
| Q6DCA0 AMMECR1-like protein | 476 | 6e-047 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DGY7 AT2G38710 protein | 999 | 2e-106 |
| A9P8R2 Putative uncharacterized protein | 867 | 4e-091 |
| B9HVW1 Predicted protein | 867 | 4e-091 |
| B9RPU3 AMME syndrome candidateprotein 1 protein, putative | 867 | 4e-091 |
| B9HKN6 Predicted protein | 841 | 4e-088 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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