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Information for unigene UN39187
| FASTA Sequence |
| Unigene ID: UN39187 | Length: 1202 |
SSR | | TTCATGGTCCACGAACAGCTCTGAAGAAATTAGTGACAAAGAGGGAAACGGAAAGAAAGAAAGAACAAAAGTGAATAGTTTTCAGC
ATTTGGTAAGAATCTCAGAACCAGTTCTAGTAATCAGAATTGTATGCTCACACTGTGCGGCTACCCCACCATCAGTCGTTAGAGTG
GTCCAGTTGTCTGGCCATGTTACACATTCCGTGGTTCCAATCGTTAGAATCGGTTCGATTGTGAATGTTTGTCCCTCAACCATTTG
CCCAGGCTCATCATTTCGGTAATGATAAATCAAGGGTTCTGAGTGGAATACTGGTCCAACACCATGACCAACAAAGCGTTCCACCA
CGTTGTAGCCATACTTTTCGGCATGCTCACTTATTCGCTTGCCGATTTTCTTGAAGCTTGCTCCATCTTTACAAACGGCTATCCCC
CTCTCTAAGCATTCCTCCGTAATCTGTACAAGTCGTTTAAAACCTTCATTTACTTCTCCACAGAAGAAAGTCCTTGATGTATCTCC
ATGGTAACCATCCAAGTAAACCGTGACATCGATGTTTATTATATCTCCATTCTGTAGCTGACGAGAATCCGGTATCCCGTGACACA
TACACTCGTTAACTGATGTACACACACTTTTAGGGAATCCACCATACCCAAGAGGCGAAGGATAAGCACCAGCTTCGATGATCATA
TCGTGCACCGCTTTGTCTATCTCATTAGTCGTCACAGAAGGTTTAACCAAAGTTCCTGCAAAGTTTAGCACCCGAGCAGCGAGCTC
GCAAGCAGCTCTCATCTTCGCAATACCTTCGGGACCAGGAATCTGGAACTCGGGAGATATATCGGGTAATACACCAGACTCAACAT
AAGGAGGCCTTGGTATGTGGTCAGGGACGAGAAGACGAGGTGATACTCTTCCACGTCGTAACGGTGGATTTCTCCTAACTCTTGAA
GTTTTCTCCAGCTCTCTCATCCTTCTGATTCTAATGGCTTCTTCTAATCCAGAGACTTTCTTAGCAGAAACGTGAAATTTTCTCGG
AGGATACGAGTTCTTCTGACCGGAGAGCAGTGATGGAGAAGGGGAAGTGAACGGAGCGAAGCTCCTGGAAGACGATACATGCTCGC
CGTTGAAAGAAGAACGGAGTTGTAACGACGACGACGACGATGGCGTGAAACTGGATAGATAAACCGTAGACGCCATTTTCGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172785 methionine aminopeptidase 1B [Arabidopsis thaliana] | 1739 | 7e-192 |
| AAG33975 methionine aminopeptidase-like protein [Arabidopsis thaliana] | 1732 | 5e-191 |
| XP_002889997 hypothetical protein ARALYDRAFT_471483 [Arabidopsis lyrata subsp. lyrata] | 1731 | 6e-191 |
| XP_002278748 PREDICTED: hypothetical protein [Vitis vinifera] | 1359 | 8e-148 |
| XP_002524411 methionine aminopeptidase, putative [Ricinus communis] | 1329 | 3e-144 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FV52 Methionine aminopeptidase 1B, chloroplastic | 1739 | 3e-193 |
| Q9FV51 Methionine aminopeptidase 1C, chloroplastic/mitochondrial | 1139 | 1e-123 |
| Q9FV50 Methionine aminopeptidase 1D, chloroplastic/mitochondrial | 970 | 5e-104 |
| Q54VU7 Methionine aminopeptidase 1D, mitochondrial | 747 | 3e-078 |
| Q6UB28 Methionine aminopeptidase 1D, mitochondrial | 730 | 3e-076 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SEJ2 Methionine aminopeptidase | 1329 | 2e-144 |
| B9HIZ3 Methionine aminopeptidase | 1313 | 1e-142 |
| A5C259 Methionine aminopeptidase | 1257 | 4e-136 |
| Q3EDD4 Methionine aminopeptidase | 1231 | 4e-133 |
| D5AA02 Methionine aminopeptidase | 1211 | 8e-131 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G13270.1 MAP1C (METHIONINE AMINOPEPTIDASE 1B); aminopeptidase/ metalloexopeptidase | 1740 | 2e-194 |
| AT1G13270.2 MAP1C (METHIONINE AMINOPEPTIDASE 1B); aminopeptidase/ metalloexopeptidase | 1231 | 2e-135 |
| AT3G25740.1 MAP1B (METHIONINE AMINOPEPTIDASE 1C); aminopeptidase/ metalloexopeptidase | 1139 | 1e-124 |
| AT4G37040.1 MAP1D (METHIONINE AMINOPEPTIDASE 1D); aminopeptidase/ metalloexopeptidase | 971 | 3e-105 |
| AT2G45240.1 MAP1A (METHIONINE AMINOPEPTIDASE 1A); aminopeptidase/ metalloexopeptidase | 707 | 1e-074 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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