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Information for unigene UN39188
| FASTA Sequence |
| Unigene ID: UN39188 | Length: 726 |
SSR | | AGAAAAAGGATGATCCCCAAAGTGTTTGAAACTCCACGGGGCTGCGTGAACGAGCTCCTGAACCCAACAGACACTCGGATATGTTC
TTGAAGAAGGTAACAACCAATGAAAAGGCTGATGACAGAGCCGATCCACCCTCCGCGTATATGGTGAACAAGGAAGTTTGGAGAGA
CTACCAGCAGAAGGATCAGAGAACCAGGCATCTCAAGCCAGTCTGGGAAATGCTTAGGGAAGAAAAGTCTGAGTACAACAGCAACG
AAAGCTATCCATTTCCCAACGTCTCCACTGAGGAAGTTAAAGATAACACCAGGAAGGGTGAGGAAGATGTATGGAATCAAGAGTGA
AGTAAGCATCTTGGTTCTCCAATTGGTACGGTCCAATATCAACAAGTAAATGGCGGAGAAAGAAGCGATCCATTTGACGAAGGAGA
CGCCAAAGGCTAAACCACCGAGGTTCGAAACATCGGTGAGGAGTTTCTTGGCAGCGATCTTGAGCTCCTCCACGTCGGAATTGACT
AAAGCAGCCGTACCCACGTCTGTCTTCATCGCCAGATAATCCACACGCCCCATCTCCCTTTGTTGACGGTACTCTCGATCTCCGTA
ATGATAATTTCAAGGTTTTATATGAATTTTGATTTTCTTATAAATTAAAAACAATAATAATAATAATCGTCCAGCTATGTTTTAGC
TATCCAGATTGTCTGTCTTCTCAGGAGTGATGATTCCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_190652 cold-regulated 413-plasma membrane 2 [Arabidopsis thaliana] | 849 | 5e-089 |
| XP_002877776 COR413-PM2 [Arabidopsis lyrata subsp. lyrata] | 839 | 7e-088 |
| XP_002274881 PREDICTED: hypothetical protein [Vitis vinifera] | 735 | 8e-076 |
| XP_002310187 predicted protein [Populus trichocarpa] | 717 | 1e-073 |
| XP_002522385 COR413-PM2, putative [Ricinus communis] | 713 | 3e-073 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9SVL6 Cold acclimation protein WCOR413-like protein beta form | 849 | 3e-089 |
| B9HEK6 Predicted protein | 717 | 7e-074 |
| B9S8R6 COR413-PM2, putative | 713 | 2e-073 |
| B1PB86 Stress responsive protein | 650 | 4e-066 |
| B9RZF2 COR413-PM2, putative | 647 | 9e-066 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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