Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN39209

FASTA Sequence
Unigene ID: UN39209Length: 621 SSR 
GGGAACTCATCCATGGCGATTTCTCAAGCTCAGTCTCTGCTTCTTCTCCTCTTCCTTTTACCTTCTTTGCACGCCACTTCTTTCCA
CAACTGTGATAAGAGGCTCGATCCCGTTAAGGTCAAGGGTGTGGAGATCTCTCCTGACCCTGTTGTGAGTGGCGAAGCCGCTACAT
TTAAGATCACTGGTTCTACTGATGAAGACATCTCTGGAGGAAAAGTAGTGATCAGTGTTTCATATTTTGGAGTTCATGTCCATACC
GAAACACATGATCTCTGCGATGAGTCTTCCTGCCCGATCGCACCTGGCAGCTTTGTCCTTTCTCATTCCCAAACACTTCCTTCTAT
TACACCCCCCGGTACTTATACGCTTAAGATGACGATAAACGACAAGGATGGCGGGCGACTGGCCTGCATTAGCTTCAAATTCAAGA
TCAAATTGTCTTCCACGGTTTATGCTAGTTCAGTTTCCCTGTGAAAATATGGTTGCCTCTTTTGTGAACCTCTCTCTCTCTCTCTG
TCGTAGACTTTTATGTGGTGTCCAAATAAAAATGCTCCTTTGAGGCTTGTGAACCTCTCTCTCGTAGACTCTGTGTTGTGTCCATA
TAACATACTCTTTTGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877317 hypothetical protein ARALYDRAFT_905501 [Arabidopsis lyrata subsp. lyrata]6406e-065
NP_189996 MD-2-related lipid recognition domain-containing protein [Arabidopsis thaliana]6253e-063
XP_002524079 Phosphatidylglycerol/phosphatidylinositol transfer protein precursor, putative [Ricinus communis]4122e-038
CAN64691 hypothetical protein VITISV_030670 [Vitis vinifera]4013e-037
XP_002270174 PREDICTED: hypothetical protein [Vitis vinifera]3995e-037

Swiss-Prot top hits (Blast detail)Scoree value
Q54YD2 Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G02782951871e-013
Q54SZ9 Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G02821071824e-013
Q6CHU5 Phosphatidylglycerol/phosphatidylinositol transfer protein1341e-007

TrEMBL top hits (Blast detail)Scoree value
Q9LXQ2 At3g441006252e-063
B9SDL0 Phosphatidylglycerol/phosphatidylinositol transfer protein, putative4121e-038
A5ALT4 Putative uncharacterized protein4012e-037
A5AFH3 Putative uncharacterized protein3976e-037
C6SXR8 Putative uncharacterized protein3922e-036

Arabidopsis top hits (Blast detail)Scoree value
AT3G44100.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein6252e-065
AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein3813e-037
AT5G06480.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein3609e-035
AT2G16005.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein2084e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  50%
 
71  50%

Unigene MembersMember information