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Information for unigene UN39214

FASTA Sequence
Unigene ID: UN39214Length: 1418 SSR 
GATCCAAAAAAAAAAGCGAATCGCGATTCCGAGCTCACTGAATCTAATGGTGTCTCTAAACGCTAGACCTGCTCCGTTCTTCGATC
CCGTGAGCATGAGTTTACCTGGTCTCGATTCGAGGGCGTCGGACTCCGACGACGGGTTTGGTTTGACTCCGATCGCAAGGAGAGAC
ACGGCGACGTTTCGCGAGGATACGACGGCGAAGATTCGGAAGCCTTACACGATCAAGAAGTCGAGAGAGAACTGGACAGAGCAGGA
GCACGATAAGTTTCTAGAAGCTCTCCACTTATTCGATCGAGACTGGAAGAAAATCGAAGCATTTGTTGGATCAAAGACAGTCGTCC
AGATACGTAGCCACGCACAAAAGTACTTTCTCAAAGTTCAGAAGAGCGGTGCTAACGAACACCTTCCTCCTCCACGACCTAAGAGG
AAAGCTAGTCATCCTTATCCTCACAAGGCTCCTAAAAATTTTGCTCTTCCCTCCCACGCTGTTGGATCTCTTCCTGCTTCAAGCGC
ACCCTTGGTTCAACCTGCTTATTTGTACAGCTCTTCTTCTGATTCACACTCACTTGTGGGGAATCCTCCTCCTGCGTCTAGCTCTT
CTTCTTCTCAGAATCATGCATTAACAACAAAACCGGTGATTCAAGAGGAACCAGGAGTCTTGGCCGCGGCTCTCCCAAAGAATCGC
TGTTGCAGCACTGGTAATAAGGAAGTTACGCCGAGATTACCAGCGGTGACTGAGTCGAATGATGATGATGATGAAGATAGTTGTGG
AAAGCCACGTAGAGTGATGCCCAACTTTGCTGAAGTCTACAGATTTATTGGAAGTGTGTTTGATCCCAACACATCTGGTCACCTCC
AGAGACTAAAGCAGATGGATCCAATAAATATGGAGACGGTTCTTTTACTGATGAGAAACCTATCTGTAAATCTGACAAGTCCAGAG
TTTTCTGAACAAAGGAAGTTGATATCATCATACAGCAGTAAAGCTTTGAAATAGATATTTGGAAAAAGCAACAATGGACCTTAAGA
GAGCAAGAAATTCTCATTCATTGGATGAGCAAATGAATGCCACTTAAGTTCTGGTTTATGTCTTTGAAGTCTTAGTTAACCGCAGT
GGTTTGTCCTATATTGTCTATATTCGTATGAGTGATAGAGAGGGTTTTGCAGAGGTATAATATATATGTATATATGTATAGATATG
TGTTTATAAGGGCAAAGTTTGTAAGCGACTTTCTTAAGTTTGGATCAATCTCAGGAGGTCTTAAGTTTCGAGTCTCTGTAAAGGCG
CAAAATAGATTTTTTTGGGGAAGTTGAGATAGAGTGAGAAATGAGAATAATAAGAAGAAAAACTTTGAGTCACTTATTTGTTACCT
TGGACACGCGTAGCCATCATTATTTGAGCAACGGGTTTCAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_192037 myb family transcription factor [Arabidopsis thaliana]10175e-108
NP_001031568 myb family transcription factor [Arabidopsis thaliana]10094e-107
XP_002874991 predicted protein [Arabidopsis lyrata subsp. lyrata]10051e-106
XP_002320823 predicted protein [Populus trichocarpa]8105e-084
ABR28335 MYB transcription factor MYB40 [Medicago truncatula]8015e-083

Swiss-Prot top hits (Blast detail)Scoree value
Q54IF9 Myb-like protein G3684e-034
Q6R0H1 Protein LHY2521e-020
P92973 Protein CCA12376e-019
Q54Z40 Myb-like protein H1533e-009
Q869R9 Myb-like protein J1382e-007

TrEMBL top hits (Blast detail)Scoree value
Q571Z4 At4g0128010173e-108
C0SVG5 Putative uncharacterized protein At4g01280 (Fragment)10093e-107
B9I8P3 Predicted protein8103e-084
D5FFH0 MYB transcription factor MYB408014e-083
B9RIS7 DNA binding protein, putative7736e-080

Arabidopsis top hits (Blast detail)Scoree value
AT4G01280.1 myb family transcription factor10565e-115
AT4G01280.2 myb family transcription factor10441e-113
AT1G01520.1 myb family transcription factor4803e-048
AT5G52660.1 myb family transcription factor4599e-046
AT5G52660.2 myb family transcription factor4599e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  17%
 
213  50%
 
62  33%

Unigene MembersMember information