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Information for unigene UN39228

FASTA Sequence
Unigene ID: UN39228Length: 1089 SSR 
GGATTGTTAACGGTGTGGTTGAAGTTGACGGTGCACCTGAAGAAGTTAAAACAGAACAGGGAGAAGATAAAGCTGCTGAAGAGAAA
GGAGTTCCGGATTTCTGGCTTATTGCATTGAAGAACAATGAAATAACTGCTGAGGAGATAACTGAGAAAGATGAAGGTGCTCTTAA
GTATCTTAAGGATATCAAGTGGAACAAGGTTGAAGAGCCAAAAGGGTTCAAGCTTGAGTTTTTCTTTGATGAGAACCCTTACTTCA
AGAACACTGTCTTGACCAAGACATATCACATGATTGATGAAGATGAGCCTATCCTCGAGAAGGCTATTGGGACGGAGATTGAGTGG
TATCCTGGAAAATGTTTGACTCAGAAGATCCTTAAAAAGAAGCCAAAGAAGTGATCCAAAAACACAAAGCCAATCACCAAGACTGA
GGACTGTGAGAGTTTCTTCAACTTCTTCAATCCACCTCAAGTTCCTGAGGACGAAGATGATCTTGATGATGAATTGGCTGAAGAAC
TCCAAAGTCAAATGGAGCACGACTATGATATTGGATCAACCATTAAAGAGAAAATCATCTCGCATGCTGTATCATGGTTCACTGGT
GAAGCGGTTGACGAAGATGACCTTGAGATGGAGGATGATGATGATGAGATTGATGAAGATGATGATGAGGAGGACGAGGAAGATGA
TGAAGAGGACGAGGATGATGAGGATGAGGACGAAGAGGAAGAGCAAGGAAAGAAGAGCGGAAAGAAGTCATCAGCTGGGCAAAAGA
AGTCTGGAAGAAGTCAACTGGCAGAAGGTCAACAAGGTGAGAGGCCACCGGAATGTAAGCAGCAGTGAGTAACCTCTTCTCAGGTG
AAGAAGATTAGGCTTATTGATGAAGAAGAAGAAGAAAGAGGTCTTTGTGTTTCTTAATTTGCTGGTTTGTATGATTATAAATCAAG
TTTTGGGTGGTGGTTTGCTAAACAAAAATTGGTTATTTGGTTTGGTTTTTCTGATTTTTCATTTGCAATGTGTTCTCCCTTGAACT
GGTTTGAGCAAATAGTATTTTGTTTTTATTGTTCACAGTTTATATATTCTTAAGCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179538 nucleosome assembly protein 1;2 [Arabidopsis thaliana]13419e-146
NP_001077917 nucleosome assembly protein 1;2 [Arabidopsis thaliana]12989e-141
NP_001189553 nucleosome assembly protein 1;2 [Arabidopsis thaliana]12924e-140
XP_002886037 hypothetical protein ARALYDRAFT_480524 [Arabidopsis lyrata subsp. lyrata]12243e-132
XP_002308283 nucleosome/chromatin assembly factor group [Populus trichocarpa]11625e-125

Swiss-Prot top hits (Blast detail)Scoree value
P25293 Nucleosome assembly protein4193e-040
Q5RF26 Nucleolin1837e-013
P87179 Cell wall integrity and stress response component 11837e-013
P13816 Glutamic acid-rich protein1811e-012
P38798 Nonsense-mediated mRNA decay protein 21721e-011

TrEMBL top hits (Blast detail)Scoree value
Q9ZUP3 Putative nucleosome assembly protein13416e-146
A8MRK6 Uncharacterized protein At2g19480.212986e-141
B9HDY5 Nucleosome/chromatin assembly factor group11623e-125
B9RK80 Nucleosome assembly protein, putative11571e-124
Q94K07 Nucleosome assembly protein11338e-122

Arabidopsis top hits (Blast detail)Scoree value
AT2G19480.1 NAP1;2 (NUCLEOSOME ASSEMBLY PROTEIN 1;2); DNA binding13423e-148
AT2G19480.2 NAP1;2 (NUCLEOSOME ASSEMBLY PROTEIN 1;2); DNA binding / binding13092e-144
AT5G56950.1 NAP1;3 (NUCLEOSOME ASSEMBLY PROTEIN 1;3); DNA binding11399e-125
AT4G26110.1 NAP1;1 (NUCLEOSOME ASSEMBLY PROTEIN1;1); DNA binding11031e-120
AT4G26110.2 NAP1;1 (NUCLEOSOME ASSEMBLY PROTEIN1;1); DNA binding10152e-110

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  75%
 
61  25%

Unigene MembersMember information