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Information for unigene UN39244
| FASTA Sequence |
| Unigene ID: UN39244 | Length: 912 |
SSR | | CTTAACACAAAACCAGCTTTCCTCTTTGTATCAGACAGGCAAGTCTATGATCATGGCTTCCTCTGCTGCTGCTGCATCGATCTCTA
TTGCAACTCTAAGGAACATCTCTCGCAAACACCAAAATCCTCTTTTGGGTTTGTCCAGTTCCTTCCATAACCTAAGGATCTCATCC
AACGGTCCAGCTTTCTCCACACGATCAGGATCCACCACCTACTCATCCACTCCAAGTTTCTTCAGAACCATGTGCAGCAGCAGCAG
CAGCGAGAACTCCAGACCCACTAAGATCCAAGAACTCAACGTGTACGAGTTCAACGAAGGAGACCGAAACAGCCCCGCGGTTCTAA
AACTCGGCAAGAACCCACAGCAGCTTTGCATCGGCGACCTCGTCCCTTTCACGAACAAACTCTACACCGGAGACCTCAAGAAACGC
GTCGGTATCACCGCGGGACTCTGCGTTTTGATCCAGCACGTTCCCGAGAAGAAAGGCGACCGCTTCGAAGCTTCTTACAGCTTCTA
CTTCGGAGAGTACGGTCACATTTCCGTTCAGGGACCTTACCTGACGTACGAGGACACGTTCCTCGCCATCACCGGTGGCTCCGGAG
TCTTCGAAGGTGCCTACGGACAGGTCTGGCTTCGTCAGCTTGTGTATCCGACCAAGCTTTTCTACACTTTTTACTTGAAAGGTGTT
GTCTCTGATTTGCCTGTGGAGCTCACCGGGAAACATGTTGAGCCGTCGAAGGATGTGAAGCCGGCGGCGGAAGCTCAGGCGGCTCA
GCACGGCGCCACTATCCTAAACTTTACCGAGTAAAATCATTTGCGTCGTTGAGCTTTCTCTGTTTGTTTTCTCTTGGATCTTAATG
GGTCTGTTAATGGGCCTAATAATGGGCTTTTAAATATGAGCCGCTTTTCGTA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889998 hypothetical protein ARALYDRAFT_334627 [Arabidopsis lyrata subsp. lyrata] | 1087 | 2e-116 |
| ABV89668 ERD12 protein [Brassica rapa] | 1083 | 5e-116 |
| NP_172786 allene oxide cyclase [Arabidopsis thaliana] | 1081 | 9e-116 |
| NP_566777 allene oxide cyclase 3 [Arabidopsis thaliana] | 937 | 5e-099 |
| XP_002875279 hypothetical protein ARALYDRAFT_484340 [Arabidopsis lyrata subsp. lyrata] | 930 | 3e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93ZC5 Allene oxide cyclase 4, chloroplastic | 1081 | 4e-117 |
| Q9LS01 Allene oxide cyclase 3, chloroplastic | 937 | 2e-100 |
| Q9LS02 Allene oxide cyclase 2, chloroplastic | 793 | 1e-083 |
| Q9LS03 Allene oxide cyclase 1, chloroplastic | 774 | 2e-081 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8IXX4 ERD12 protein | 1083 | 4e-116 |
| Q0WP37 Putative uncharacterized protein At3g25780 | 937 | 3e-099 |
| D1GC08 Allene oxidase cyclase | 900 | 6e-095 |
| D1GC09 Allene oxidase cyclase | 899 | 8e-095 |
| D1GC07 Allene oxidase cyclase | 892 | 5e-094 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G13280.1 AOC4 (ALLENE OXIDE CYCLASE 4); allene-oxide cyclase | 1082 | 3e-118 |
| AT3G25780.1 AOC3 (ALLENE OXIDE CYCLASE 3); allene-oxide cyclase | 938 | 1e-101 |
| AT3G25770.1 AOC2 (ALLENE OXIDE CYCLASE 2); allene-oxide cyclase | 794 | 7e-085 |
| AT3G25760.1 AOC1 (ALLENE OXIDE CYCLASE 1); allene-oxide cyclase | 775 | 1e-082 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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