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Information for unigene UN39268
| FASTA Sequence |
| Unigene ID: UN39268 | Length: 1079 |
SSR | | GTAATTAATCTGCTTCTGTTATTAGTAAACATCTTGCAACCATGGAGTAGAAAGAGACGTATGACCTTTCTTGACGTAAACAGATA
CGTATACATATGTGAGATCACGTGTGTATATATGAATTTATCTATATATACTGTATAAACTATAATGTGTGTGCATAAATACATAC
ATACATAGCTATGTAGATTATGGGTGCCAGTTCATGTTAGGAAGCTGAAACGCCTGTCTTAAAACCCCATGATCAGCTAGAGTCGA
CGTCGTATCGATGACTCCATTTCCATGAAACCCCGAACTCTGAGGAATTTCACTAAGCATCGAGACAAATGAGACATTGTAGTTAT
CATTATTGAGATCACTCGTATGATGGAACCTCTTGCTCGATAAGAATGACCCGAAAGAAGATGATCCAGTGGCCTCATGACCTATA
CGATACTGACCACACAAGGAACGTTTGTCCGATGAAACGGCCATACCATCGAAAAAGTGTTCTTCATTGTTATTATTGTTGTTGTT
GTTGTCTAAGACCGATGTGGAAGATGAATTAGCAGATGATTTTGAGAGCATTCCTTCCATGAGATCCTCTCTTAGTAATACTCTCT
CCATTGTTGGTCTCTGTGAACTATTCTTCTTATAGATCCTACAAAGAACCCAATCATAGCCGTAGTGAGTTTTTCCTTGACGTGGC
TTTCCAGTAACCAGAAGTTGCTGCCCGATTCGGCCTAACGCCATTGGGATACTTCCGATCTCTAGGACTAAAGAAGTACCACTCTT
GTTCTCCAAAACTTGCCTTGCTTGGAAGCTCCCAAGGATCAAACTTGTAAAGATCAATCTCGGCGATGATTGAGACCGGAAGTGGA
ATAGAAGCAGCTTTCTTCTTGAGGTAATGAACTACAAGTTCTTCGTCGGTCGGGTGAAACCGAAACCCGGGAGGGAGATGCGGATG
ACCCGGCCCTATGGTCGAATCCCCCATGTTTTCCATCAACTAGCTATCTTCAAATGAGTTATTCTACGAAGACAGTCTCATGATAC
TCAAGGGAGAATATGTAGGAAGAGGATTTGATATTTTGGAGAGTGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564771 NAC domain containing protein 25 [Arabidopsis thaliana] | 772 | 8e-080 |
| XP_002888109 ANAC025 [Arabidopsis lyrata subsp. lyrata] | 762 | 1e-078 |
| AAM65392 NAM protein, putative [Arabidopsis thaliana] | 756 | 6e-078 |
| AAB71483 similar to NAM (gp|X92205|1321924) and CUC2 (gp|AB002560|1944132) proteins [Arabidopsis thaliana] | 524 | 5e-051 |
| XP_002519008 transcription factor, putative [Ricinus communis] | 487 | 9e-047 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZNU2 NAC domain-containing protein 18 | 456 | 2e-044 |
| O49255 NAC domain-containing protein 29 | 392 | 4e-037 |
| Q52QH4 NAC domain-containing protein 68 | 387 | 2e-036 |
| Q7F2L3 NAC domain-containing protein 48 | 386 | 2e-036 |
| Q39013 NAC domain-containing protein 2 | 378 | 2e-035 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GY42 At1g61110 | 772 | 6e-080 |
| Q8LAF7 NAM protein, putative | 756 | 4e-078 |
| O22734 F11P17.16 protein | 524 | 3e-051 |
| B9RZ39 Transcription factor, putative | 487 | 6e-047 |
| B9HYM0 NAC domain protein, IPR003441 | 480 | 4e-046 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G61110.1 anac025 (Arabidopsis NAC domain containing protein 25); transcription factor | 772 | 3e-082 |
| AT3G15510.1 ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2); transcription factor | 462 | 3e-046 |
| AT1G52880.1 NAM (NO APICAL MERISTEM); transcription factor | 456 | 1e-045 |
| AT3G04070.1 anac047 (Arabidopsis NAC domain containing protein 47); transcription factor | 404 | 2e-039 |
| AT3G04070.2 anac047 (Arabidopsis NAC domain containing protein 47); transcription factor | 404 | 2e-039 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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