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Information for unigene UN39295

FASTA Sequence
Unigene ID: UN39295Length: 743 SSR 
GGATATAAACTCATCACTCAATTTTCGCTGCCCTTCACCTCGTCCTTGTAGCGCCTCTCTCTCTCTCTCTGTAAGATTTAAAAAGG
AGCTTTTGCTTTTACTTAGTTTCCAAGGCAATTCAACATGTCTGGTGATGAAGCTGCTGCTGCTCCTGCTGTTGTTCCTCCGGTTG
CTGAGGCAGCTGCTATTCCAGAGGACATGGATCTGTTGACTGCATTGGAGTTGACGCTAAGGAAAGCTCGTGCTCACGGTGGTGTG
GTTCGTGGTCTCCATGAAAGCGCTAAGCTTATCGAGAAGCGTTCTGCTCAGCTCTGTGTCTTGGCCGAAGATTGCAACCAGCCTGA
TTACGTCAAGCTGGTCAAAGCTCTTTGCGCTGATCACAGCATCAACTTGCTTACTGTTCCAAGTGCCAAAACCCTCGGCGAGTGGG
CTGGTCTTTGCAAGATTGATTCAGAGGGCAATGCAAGGAAGGTTGTTGGGTGCTCGTGCCTTGTAGTCAAGGATTACGGTGAGGAG
ACAACTGCACTCAACATCGTCAAGAAGCATATTGAATCTAACTAAAATCAGCAAATGTCGGATCTCTCAACCATATGCTTCCCATT
CCCAAAAGAAAACCCGTTTCATTTTTCTTGTGTCCACTTTCTGTTCCTCTTTTGTCTTATTCGTTGTTTTTGAATATTGAATACAA
AACTTGTTAGTAGACAGGTCTTGAGATTTGTTTGGAAAATGCAAGTTTTGCGGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180766 40S ribosomal protein S12-2 [Arabidopsis thaliana]6703e-068
NP_173045 40S ribosomal protein S12-1 [Arabidopsis thaliana]6264e-063
XP_002887897 predicted protein [Arabidopsis lyrata subsp. lyrata]6211e-062
XP_002890138 40S ribosomal protein S12 [Arabidopsis lyrata subsp. lyrata]5897e-059
XP_002881214 40S ribosomal protein S12 [Arabidopsis lyrata subsp. lyrata]5816e-058

Swiss-Prot top hits (Blast detail)Scoree value
Q9SKZ3 40S ribosomal protein S12-26701e-069
Q9S9P1 40S ribosomal protein S12-16262e-064
Q9XHS0 40S ribosomal protein S125142e-051
Q76I81 40S ribosomal protein S123725e-035
P84175 40S ribosomal protein S123725e-035

TrEMBL top hits (Blast detail)Scoree value
B9GT02 40S ribosomal protein S125743e-057
A9P9K3 40S ribosomal protein S125582e-055
A9PDC2 40S ribosomal protein S125582e-055
B9S6H9 40S ribosomal protein S125582e-055
A9PJY6 40S ribosomal protein S125521e-054

Arabidopsis top hits (Blast detail)Scoree value
AT2G32060.1 40S ribosomal protein S12 (RPS12C)6763e-071
AT2G32060.3 40S ribosomal protein S12 (RPS12C)6763e-071
AT2G32060.2 40S ribosomal protein S12 (RPS12C)6763e-071
AT1G15930.2 40S ribosomal protein S12 (RPS12A)6271e-065
AT1G15930.1 40S ribosomal protein S12 (RPS12A)6271e-065

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  60%
 
201  20%
 
191  20%

Unigene MembersMember information