|
Information for unigene UN39302
FASTA Sequence |
Unigene ID: UN39302 | Length: 1344 |
| SNP | GGACTTAAAGCAGCAGCAGCCGAAGCGCTGGGTTGAGAGAGACAAAAAGTAAGCCATGTCTGTGAAAGCAATTATCGTATCATCGG
TGGTTCTGCTGATCCTCGTAGCCGCATCAGCGGAGGCTTATACAGGATTCGATGAGTCAAACCCGATCCGTATGGTCTCCGACGGT
CTTAGGGAGATAGAAGAATCCATTGTCCAGATCTTAGGACAATCTCGTCACGTTCTATCCTTCGCTCGCTTCACTCACCAGTATGG
GAAAAGGTATGAGAACGCGGAGGAGATAAAGCTCAGATTTTCGATTTTCAAGGAGAGTCTTGACTTGATCAGATCCACCAACAAGA
AAGGCTTGTCTTACAAACTTGGCCTCAATCAGTTTGCTGATATGACCTGGGAAGAATTTCAAAGTAGCAAGCTTGGTGCTGCTCAA
AACTGCTCTGCCACTTTAAAGGGAAGCCACAAACTCACCAAAGAAGCTCTTCCAGAAACCAAAGACTGGAGAGAAGATGGTATTGT
TAGTCCAGTCAAAGAACAGGGCAAATGTGGATCTTGCTGGACTTTCAGTACTACTGGAGCTCTTGAGGCAGCTTATCATCAAGCAT
TTGGGAAAGCAATATCTCTCTCTGAGCAACAGCTAGTGGATTGTGCTGGAGCTTTCAACAACTTTGGCTGCAATGGTGGCCTTCCT
TCCCAAGCCTTTGAATACATCAAATCCAACGGTGGCCTCGACACAGAGGAAGCTTATCCTTACACCGCTAAAAACTGAACCTGCAA
ATATTCAGCTGAAAACATCGGTGTACAAGTCCTCGACTCTGTCAACATTACTATGGGTGCTGAAGATGAACTGAAGCATGCGGTTG
GATTGGTGCGACCAGTAAGCATAGCATTCCAGGTTATACACTCGTTCCGGCTTTACGATGGCGGAGTTTATTCTGATAGTAACTGT
AATAATACATCAAAGGATGTGAACCACGCGGTGTTGGCGGTTGGTTATGGAATTGAAAAAGGTGTTCCATATTGGCTTATAAAGAA
CTCATGGGGAGCGAGTTGGGGTAACAAAGGTTACTTCAAGATGGAGATGGGGAAGAACATGTGTGGTATTGCGACATGTGCATCTT
ACCCGGTTGTGGCCTAGATGATCAGCGAATGTGGTCGCTCAATGACTAGATTACGTTCACGTTTGCATGTTTATTGGATTGAGACA
TTATTTCAAAGTTGGGGGTTGAGAGTGCATAGTGTTTACTATGCTTGTTGTATGTACAATAAGGTCTGTTCATATGTACAATATAA
TTCAATAAACCACAGACGACAAATTAATAATATATATACATGTTGAACTTAAGG
|
|
|
GenBank top hits (Blast detail) | Score | e value |
BAJ34286 unnamed protein product [Thellungiella halophila] | 1663 | 6e-183 |
AAL60582 senescence-associated cysteine protease [Brassica oleracea] | 1654 | 6e-182 |
NP_568921 thiol protease aleurain [Arabidopsis thaliana] | 1649 | 2e-181 |
AAN31820 putative cysteine proteinase AALP [Arabidopsis thaliana] | 1644 | 9e-181 |
ABA71355 cysteine protease [Brassica napus] | 1628 | 6e-179 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q8H166 Thiol protease aleurain | 1649 | 1e-182 |
Q8RWQ9 Thiol protease aleurain-like | 1535 | 2e-169 |
P25778 Oryzain gamma chain | 1337 | 1e-146 |
Q10717 Cysteine proteinase 2 | 1316 | 4e-144 |
Q40143 Cysteine proteinase 3 | 1314 | 7e-144 |
TrEMBL top hits (Blast detail) | Score | e value |
Q8W178 Senescence-associated cysteine protease | 1654 | 4e-182 |
B9DG56 AT5G60360 protein | 1649 | 2e-181 |
Q3HM22 Cysteine protease | 1628 | 4e-179 |
Q2V2W9 Putative uncharacterized protein At5g60360.2 | 1627 | 6e-179 |
A8MQZ1 Uncharacterized protein At5g60360.3 | 1593 | 5e-175 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G60360.1 AALP (Arabidopsis aleurain-like protease); cysteine-type peptidase | 1650 | 7e-184 |
AT5G60360.2 AALP (Arabidopsis aleurain-like protease); cysteine-type peptidase | 1631 | 1e-181 |
AT5G60360.3 AALP (Arabidopsis aleurain-like protease); cysteine-type peptidase | 1593 | 3e-177 |
AT3G45310.1 cysteine proteinase, putative | 1536 | 1e-170 |
AT3G45310.2 cysteine proteinase, putative | 1517 | 2e-168 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|