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Information for unigene UN39319
| FASTA Sequence |
| Unigene ID: UN39319 | Length: 1117 |
SSR | | GCTTAATTTAAAATAGTTGAGTAGAAATGCAAGTCTCTAGGAAGATGACTAAACCACATACCTTAACCTTACAAAAACCATGAGCA
GTAGTTCTTAAACCAAAACAAAAACAGGACATTTTTTGTGGACTTTTTTCGTTCCTGATAAAAAACGTTATAAAGATAATAAGCGT
ACACATTCAAAACTTTAAACCTGTCTTCAGACCTCACTCTTCTTTTTCTTTTTATCCTTCTTTTCTTTCTTCTTGGCAGGCATTTC
TGTTTCTTCCTCCTCGTGTTTTCTCTTCTTCTTCTTCTTTGAAGGTTCGTCTGCTTTGGCCTCTTCGGCTTCAGCTTCTGTTTTCT
TCTTCTTCGACTTCTTCTTAGAAGGTTCCTCGGTTTTGGCTTCTTCTTCCTCTGCATCATCAGCCTTCTTCTTTTTCTTTTTATCT
TTCTTCTCCTTGGCACCGTTCTCAGCTGCGGAAGTTTGTCCAAGAAGAGAGTCTGCAGCAGTGTTGTAAGTCTTAGCAGGAGTGAT
CAGACCTCCAGATCCAATCTTCTTATCCTTGTCATAAACTTCAATCTTTGGTTTGCCTTTAGCTGAACCAGACAGACGTCCCATGT
CTTTCCCTTCCAGACTTCTCAACCGTGTTTCAACCTTTAAACGGCTTTCAACTCCCATAGTGTTGTCTTCGCTATCACCAAGAGCA
TCACACCGGATAGCAAGGGCAGCTTTTGCAGCTAGTGAACGTGAGATCTTAGCCTTGTCCTTGGGTGCAGCTTGGCCAACGAGAGA
AGCATGGTAAATCAGACCGTATTTAGGAGTGTTGTGTTTAGTCTTGAGGGCTCTAAATAGAGCCTTCTCAGCTCCAAGAATCTGAA
CTGTGCTCCCAGGCTGCTTTGAGAGGTTCAACAGACTACCCCCATGAGAAATCAGACGAGCACCGACAAGCTCTCCAACGAGGGCA
GTCAGATTCGGTGCGATTGTGTTCATTCTACTCTTCAGGTAGTCGTAAAGCTGAGCTCTGTACTCGGCAAGAGACAGAACCTGGTC
GCAGAGTTCCCTGATGTGCAACAAATCAAGGTCGCTGACTTCAGTTCCCATAGATATCACAGATGCCTCTTTTAGTTCCGCTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_198064 putative nucleolar protein 5-1 [Arabidopsis thaliana] | 1306 | 1e-141 |
| XP_002874406 hypothetical protein ARALYDRAFT_489610 [Arabidopsis lyrata subsp. lyrata] | 1267 | 4e-137 |
| NP_187157 putative nucleolar protein 5-2 [Arabidopsis thaliana] | 1207 | 3e-130 |
| XP_002884489 hypothetical protein ARALYDRAFT_896572 [Arabidopsis lyrata subsp. lyrata] | 1207 | 3e-130 |
| XP_002273273 PREDICTED: hypothetical protein [Vitis vinifera] | 1059 | 5e-113 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04658 Probable nucleolar protein 5-1 | 1306 | 5e-143 |
| Q9MAB3 Probable nucleolar protein 5-2 | 1207 | 1e-131 |
| Q9QZ86 Nucleolar protein 58 | 702 | 5e-073 |
| Q6DFW4 Nucleolar protein 58 | 692 | 7e-072 |
| A3LUT0 Nucleolar protein 58 | 687 | 3e-071 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A2XGN8 Putative uncharacterized protein | 1036 | 1e-110 |
| B9F8G0 Putative uncharacterized protein | 1036 | 1e-110 |
| Q0DRW2 Os03g0350100 protein (Fragment) | 1036 | 1e-110 |
| Q10LH5 Nucleolar protein NOP5, putative, expressed | 1036 | 1e-110 |
| B8APG2 Putative uncharacterized protein | 1032 | 4e-110 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G27120.1 SAR DNA-binding protein, putative | 1306 | 4e-144 |
| AT3G05060.1 SAR DNA-binding protein, putative | 1207 | 1e-132 |
| AT5G27140.1 SAR DNA-binding protein, putative | 659 | 4e-069 |
| AT1G56110.1 NOP56 (Arabidopsis homolog of nucleolar protein Nop56) | 538 | 5e-055 |
| AT3G12860.1 nucleolar protein Nop56, putative | 501 | 9e-051 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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