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Information for unigene UN39323

FASTA Sequence
Unigene ID: UN39323Length: 1437 SSR 
AAACCGATAAAAGTTTGAACATCCCTTATTTCCTTAATAAGGACCACATTCTTATTCGACCGTAGAAAACAACTTCAAGCTAAGCA
AAAAAGCTATACAAGAAATAAAAGTGCCTGAGAGATTCAGCAGAAACTTCTTCTCTATATATACACACACTACACACCCAAAGGAT
CATGAAGCTTGGTTCATATGCTTCTATTTTCTCGCTCTTCTGCACTCCCATTCTCCTTGAGCTTATACGTTCCCTCTACATACAAC
TCCGTGTCCCACAGAAACGTCCCAAACGCCACAGCTTCCAGAACCAACCGCTTCAGACTCGAATACGACGTCACAATCGTCTCATC
CTCAATTTCCTCCGCTCCAAAAAGAGCCAAACTCTGCTTCTCTATCAGATTCCTCGCTTCCTCCGTCCTCGGCCTCGCGCACCTCC
GCAGCGTCTCGGGTTCGAACCCCGTGACGTAATGCCTCAGCTTCTCCTCGGTGGAGGTGCCCGTCGTGAAAGATGATCCAAAGACG
GGACCTTTCAGGTACCCGCTCCCGCGGAGATCCGACAACGAACACTCGAGCTGGTGCCTGAGGGAGGCGGATTTCAAGAAGTAACC
GTACGAGATGGAGGCGGCGTACACCTCCCTGAGGTGGAGCTTCTGTATCTGCGTCGTCGCCCAGTTGTCGGTCACGCACGCGTTGA
CACGTAGCCCGATGACCGTGCTGACGTGTTCTTTGATGAGCTCGAGGGCGTCGCAGGTGTGGATCGACTCTAGCTCCCAGTCTTTT
GTGGGCCAGATCTCGAGTCTTCCGTTGTAGATGCATCTAGAGAGCTTCGGAGCGAGAGGGACACGTATCTCGGAGTATTTGTAGAA
TATTAACATGTACATAATGTCTTGGACTGCTGTTTTGCAGTAACGTTCCTTGAGTTGAGCTATCCTTCTGTGGAGGGAAGCTTCAT
CGGAACCAGAGCTAAGAGCCATACGAGCCAAAGCGGCTTCACGCTCCTCAGCCAGCTGCTTGAGCTCATCAGCAGCAGCGTAGTGA
AACAGCTGCCTCTTGTTGAGCAGGACGCTTCTCAGAAACCTCCCCTGCGCCGATCGAAGCTCGAGCGGCGCGTTAAGGCTGCTTCC
AGGCTCACACCGGCTCTGCCCCGCCGTCGCAACCACGACCATCGATCTGTACTGAACCTTCCGCATCGCCGGAAGAGAAAATCCTC
CTCCTCCTCCTCCATCGCCGCTCTGTCTCCTCAAACGCGAGGGGAGAAACGGGAGCGCCGCTTGACTTGAGAGACAAGTACTATCC
ATTGTCGGCGATTTGAGCAAAGCAGAAAACCTAGAAACTGTAAAAGGAGAGATTTACGGATTGTGAATGAGAGAAAGAAGGAGAGA
AAGACTGATTTTCAGCGGATTAGTGGGAGAAGTGGCGTTTATGGATAAGGCTGAGAAGAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884641 hypothetical protein ARALYDRAFT_896892 [Arabidopsis lyrata subsp. lyrata]16053e-176
NP_566302 uncharacterized protein [Arabidopsis thaliana]15964e-175
XP_002863048 hypothetical protein ARALYDRAFT_920669 [Arabidopsis lyrata subsp. lyrata]7792e-080
XP_002863907 hypothetical protein ARALYDRAFT_917767 [Arabidopsis lyrata subsp. lyrata]7792e-080
NP_199670 uncharacterized protein [Arabidopsis thaliana]7513e-077

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9S7A6 F21O3.2 protein15962e-175
Q9FJL1 Gb|AAF02142.17512e-077
B9SYK3 Putative uncharacterized protein7234e-074
B9GQN1 Predicted protein4781e-045
Q56ZJ5 Putative uncharacterized protein At3g07310 (Fragment)4555e-043

Arabidopsis top hits (Blast detail)Scoree value
AT3G07310.1 unknown protein15961e-177
AT5G48590.1 unknown protein7511e-079
AT3G17800.1 mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem3111e-028
AT3G17800.2 mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem3083e-028
AT1G48450.1 unknown protein3065e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
185  29%
 
202  12%
 
197  41%
 
213  18%

Unigene MembersMember information