RadishBase

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Information for unigene UN39334

FASTA Sequence

Unigene ID: UN39334	Length: 1073	SSR
GGGAAAAAAAACCCTGGTCTATCTATCTGGAGAATGGGTAGTATCCCGACATGAGGAGGTGAATCTTTCAATACAGTGCGAAAACC CTAAATCTTGTGGTTTAATCCCCATTCTACTTTGCTCCGACGATGATGAATAATAACTTAACAGACGATTCCGAGTGGGAAGTGAG ACCTGGTGGTATGCTCGTCCAACGAAGAGACGACGCTTCCTCCTCCGAACCACAACCTCTCCACCACGATCCCACCTCTGCTTCCG CCGTTTATGCTCAGACCATCAGGATCAACGTTTCCCATGGCTCATCGCACCACGATCTTCACGTCTCTCCCCTCGCCACTTTCGGG GATGTGAAGAAAGCCCTTGTCCAGAAAACTGGATTAGAGGCTACTAGCAATCTGAAGATCTTGTTCAGGGGAGTTGAGAAAGATGA CGCTGAGCAACTGCAAGCTTCTGGTGTTAAGGATGGGTCTAAGCTTGTCCTTGTGGAGGAACCTAATAATAATAATAATAAGAGAG TAGTTGAACAGCAGCCTCCAGTGATGACCCAAGAGATGGCCAAGTCTATTGCTGCAGTTAAAGCTGTCTCTGGAGAGATCGATAAG CTCTCGGACAAAGTTGTTGCTTTAGAAGTTTCTGTTAATGGAGGGACGAAAGTTGCGGTGGAGGAGTTTGACATGACTGCTGAGCT TCTCATGAGGCAGTTGCTTAAACTGGATGGTATCGAGGCAGAAGGAGAAGCTAGAGTACAGCGAAAGGCAGAGGTGCGTAGAGTGC AAAAGTTGCAGGAGGCTGTGGATACGTTGAAAGGGAAGATGTTCAAACCCGTTTGTGGATCAAACCAAAGCAGCGGCTGTAAGCAC TGAGTGGGAAACATTCGGAAACGGTGTTGGAAGCTTGGACCCTCCTCCTCCTGCTTCTCCTTCTGCTAATGTAACTCAAGACTGGG AGAAATTTGACTGACCATTTCATTATTGTTACGTATCCAAAAAAAAGTAATAAAGAAAAATTTTCTTGTTCCTTTTTAATTACTGC TGTTAAATGAAAAAAGAAATGATCAGAAAAGTTTCGGTTTT

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
AAC14405 unknown [Arabidopsis thaliana]	841	8e-088
NP_190746 BCL-2-associated athanogene 4 [Arabidopsis thaliana]	835	4e-087
AAM63329 unknown [Arabidopsis thaliana]	833	7e-087
XP_002877823 hypothetical protein ARALYDRAFT_485533 [Arabidopsis lyrata subsp. lyrata]	821	2e-085
XP_002271076 PREDICTED: hypothetical protein [Vitis vinifera]	463	6e-044

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
Q8LDA0 Putative uncharacterized protein	845	2e-088
Q8RX71 At3g51780/ORF3	845	2e-088
O65021 Putative uncharacterized protein	841	6e-088
B4FV61 BCL-2 binding anthanogene-1	438	3e-041
B7ZZK8 Putative uncharacterized protein	437	4e-041

Arabidopsis top hits (Blast detail)	Score	e value
AT3G51780.1 ATBAG4 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 4); protein binding	848	5e-091
AT5G52060.1 ATBAG1 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 1); protein binding	323	4e-030
AT5G07220.1 ATBAG3 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 3); protein binding	297	4e-027
AT5G62100.2 ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2); protein binding	287	6e-026
AT5G62100.1 ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)	265	2e-023

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


12	3			33%


9	4			44%


10	1			11%


6	1			11%

Unigene Members	Member information