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Information for unigene UN39358

FASTA Sequence
Unigene ID: UN39358Length: 1068 SSR 
GGTAATAAACAAAATTAATATGAGATATACAAATATCTTTTCGAACTTTCTCTTACAATGTCGAGACAGAGATTGACAGTGTATGC
TGTAAAAAGAAAACTGAGGAATCACTAACCAGAACAGAGCGAAACATTCTTCTTAAGCTTGCAAGCGTGTCATTATTACACATCTC
CATATTGAACTCAAAACATCTTAAAGAATACTAAAGACTCCAAGTAAAAATCTCTTACCTTATACCAGAGTTTATTTTACTCCATC
AAGTTATGAATCATTTAAAAAAATCTCCATACTCTGTTGCTGTTAAAAGTATATTTTTTTCAATAAAGATTAATTAACACGCACAG
CCACCACTTTGTTGGTCCGCTTGAGACGAATGGTTCGATGACTTAAGGTTGACATCAACCATATCGCCTTGTTTCGCTGAAGAAAG
TGTATCCATTCCTGGTAATGCTGCTGAAATCTTCCGGAATAGTGGCTTGATGTTAAATCCTGCTTTTGCACTCGTCTCTATGAATA
TAACTCCAAAATCACGAGCTTTGTTATCCCCTTCCTCTATCGACACTTGCCTCTTGTCAACGAGATCAGTTTTGTTACCCACGAGA
ACAATTATGACATCGTTACCTCTCTCTGTACGAACATCCTCAACCCACTTCGAGGTGTTCAAGAACGACTGCCTATTAGCAACATC
ATAAACAATGACAGCAACAGAGGAATCTCTGATATAACTTGGTATCAGACTTCGAAACCTTTCCTGCCCGGCAGTATCCCAAAGCT
GGAGACGAAGAGTCCTATCCTCAAGGTACATTGTCTTTGACAAGAAATCAATCCCAATTGTTGCCTGGTAGGTGGTATCGAATTTG
TCGTACATGAAACGAGTGATGATGCTGGTCTTGCCGACGGATTGATCTCCCAGGAAGACGAGCTTGAACTTTGCTAATGGTGTCAC
CGCCGCCATTTTTTTCTCGGTCTCGAGAGATATCTCTCTCTCTCTCTTCACCGTCACGATAAGAGAGAGGTATTGGCAGATCTGAG
AGTTTGAGATTTTTCAGGTGCAGATTTGAGAATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_196588 RAB GTPase H1E [Arabidopsis thaliana]9734e-103
XP_002871412 hypothetical protein ARALYDRAFT_487852 [Arabidopsis lyrata subsp. lyrata]9725e-103
AAZ67607 80A08_22 [Brassica rapa subsp. pekinensis]9691e-102
XP_002307084 predicted protein [Populus trichocarpa]9564e-101
XP_002531261 protein with unknown function [Ricinus communis]9538e-101

Swiss-Prot top hits (Blast detail)Scoree value
O80501 Ras-related protein RABH1B8933e-095
Q9SMR4 Ras-related protein RABH1C8396e-089
P20340 Ras-related protein Rab-6A7473e-078
P35279 Ras-related protein Rab-6A7473e-078
Q5RAV6 Ras-related protein Rab-6A7473e-078

TrEMBL top hits (Blast detail)Scoree value
Q9LFT9 GTP-binding protein9733e-103
Q4ABP5 80A08_229698e-103
B9H4T8 Predicted protein9563e-101
B9SZ42 Putative uncharacterized protein9536e-101
A9NSV9 Putative uncharacterized protein9268e-098

Arabidopsis top hits (Blast detail)Scoree value
AT5G10260.1 AtRABH1e (Arabidopsis Rab GTPase homolog H1e); GTP binding9741e-105
AT2G22290.1 ATRABH1D (ARABIDOPSIS RAB GTPASE HOMOLOG H1D); GTP binding9077e-098
AT2G44610.1 RAB6A; GTP binding / protein binding8942e-096
AT4G39890.1 AtRABH1c (Arabidopsis Rab GTPase homolog H1c); GTP binding / protein binding8404e-090
AT5G64990.1 AtRABH1a (Arabidopsis Rab GTPase homolog H1a); GTP binding7671e-081

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  100%

Unigene MembersMember information