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Information for unigene UN39388

FASTA Sequence
Unigene ID: UN39388Length: 1579 SSR 
TTTGATCGTCTCGTCGTCCTCACAGTTTCATCGGCCGTTGACTATCTCCGGCGACAAGAGAGAGAGAGAGAGATCAGAATCGTATC
GGTTTCTAATTTCTTTCTCGTTCAAGCTTATTAAAAAATGGCTGAAGCTGATGATATTCAACCCATCGTCTGTGACAATGGTACCG
GTATGGTCAAGGCTGGATTTGCTGGTGATGATGCACCCAGGGCTGTTTTCCCTAGTGTTGTTGGTAGGCCAAGGCATCACGGTGTC
ATGGTTGGGATGAACCAGAAGGATGCTTACGTTGGTGACGAAGCCCAGTCCAAGAGAGGTATTCTCACCTTGAAGTACCCGATCGA
GCATGGTGTTGTGAGCAACTGGGATGACATGGAGAAGATCTGGCATCACACTTTCTACAACGAGCTCCGTATTGCTCCTGAAGAGC
ACCCCGTTCTTCTTACCGAGGCTCCTCTTAACCCAAAGGCCAACAGAGAGAAGATGACTCAGATCATGTTCGAAACATTCAACTCT
CCGGCTATGTATGTCGCTATCCAAGCTGTTCTCTCCCTGTACGCCAGTGGTCGTACTACCGGTATTGTGCTGGATTCTGGTGATGG
TGTGTCTCACACTGTGCCGATCTACGAGGGTTTCTCTCTTCCACATGCCATCCTCCGTCTTGACCTTGCTGGTCGTGACCTTACTG
ATTACCTCATGAAGATTCTTACCGAGAGAGGTTACATGTTCACCACAACAGCAGAGCGGGAAATTGTGAGAGACATCAAGGAGAAG
CTTTCCTTTGTCGCTGTGGACTACGAGCAGGAGATGGAGACTTCCAAATCCAGCTCCTCCATCGAGAAGAACTACGAGTTACCCGA
CGGACAAGTGATCACCATCGGTGCCGAGAGATTCAGGTGCCCAGAGGTTCTTTTCCAGCCATCGTTCGTGGGAATGGAAGCTGCTG
GAATACACGAGACGACCTACAACTCGATCATGAAGTGTGACGTGGATATCAGGAAGGACTTGTACGGTAACATTGTGCTCAGTGGT
GGAACCACTATGTTCTCGGGGATTGCAGACCGTATGAGCAAAGAGATCACGGCACTTGCACCAAGCAGCATGAAGATTAAGGTCGT
TGCACCTCCCGAGAGGAAGTACAGTATTTGGATCGGTGGTTCAATTCTTGCTTCCCTCAGCACATTCCAGCAGATGTGGATCTCCA
AGGCTGAGTACGATGAGGCAGGTCCAGGGATTGTTCACAGGAAATGCTTTTAAGCTCTCTCTCTCTCAATGAGAAGGCTACACAAG
CTGGGTATTATGAATGGGATCAAAGTTTTTTTTTTTTGTTTCTATTTGCTTCTCCATTTGTTTGTTTCATTTGCTTTCTTTTTGTT
GTCGTTTCTATGCACTTGCGTGTGACAAAACTCTCTGGGTTTTACTTTACGTCTGCGTTTCAAGAAACAGCTTTCGTTTTGCGTTT
TAGTCCCATTGTTTTGTAGCTCGAGTGCGCCTCTATTTTTCTGTATTTCTTTCAAAAAAACTGGGAAGAAGGAGCTTGATAATACT
CTTTGCATTTGTTAATATAAAGTATTGTACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_188508 actin 2 [Arabidopsis thaliana]19567e-217
NP_175350 actin 8 [Arabidopsis thaliana]19532e-216
AAM64898 actin 8 [Arabidopsis thaliana]19504e-216
BAH20120 AT3G18780 [Arabidopsis thaliana]19504e-216
AAC49523 actin 8 [Arabidopsis thaliana]19478e-216

Swiss-Prot top hits (Blast detail)Scoree value
Q96292 Actin-219563e-218
Q96293 Actin-819537e-218
A2XLF2 Actin-118731e-208
Q10DV7 Actin-118731e-208
P53492 Actin-718579e-207

TrEMBL top hits (Blast detail)Scoree value
Q0WL95 AT3G18780 protein19565e-217
B9DHA3 AT3G18780 protein19502e-216
Q8LB94 Actin 819502e-216
Q9ZTP9 Actin19342e-214
C3TX68 Actin18723e-207

Arabidopsis top hits (Blast detail)Scoree value
AT3G18780.2 ACT2 (ACTIN 2); structural constituent of cytoskeleton19572e-219
AT1G49240.1 ACT8 (ACTIN 8); copper ion binding / structural constituent of cytoskeleton19545e-219
AT5G09810.1 ACT7 (ACTIN 7); structural constituent of cytoskeleton18586e-208
AT3G12110.1 ACT11 (actin-11); structural constituent of cytoskeleton18542e-207
AT2G37620.1 ACT1 (ACTIN 1); structural constituent of cytoskeleton18424e-206

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
215  36%
 
192  14%
 
181  7%
 
204  29%
 
72  14%

Unigene MembersMember information