Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN39399

FASTA Sequence
Unigene ID: UN39399Length: 794 SSR 
GGACCACTGCCTAGGTGCTTTCCAGAGACGCGCATCCACAAACCCTAAGCAAATCGTCTCCTCTCTCTCATCCATCTGTGAACATG
TCGAGGAGAAAGACCAGAGAGCCCAAGGAGGAAACCGTCACTCTCGGACCTGCTGTTCGTGACGGAGAGCAAGTATTCGGTGTTGT
TCACATCTTTGCTTCTTTCAATGACACTTTCATCCATGTGACTGATCTGTCCGGAAGAGAAACTCTCGTCCGTATCACCGGTGGGA
TGAAGGTTAAGGCTGACCGTGATGAGTCTTCTCCTTATGCTGCTATGCTTGCAGCTCAAGATGTTGCTCAAAGATGCAAGGAGCTT
GGCATCACAGCCATGCACGTGAAGCTCCGTGCCACTGGAGGAAACAAAACCAAGACTCCAGGCCCTGGTGCTCAGTCTGCTCTCAG
AGCCCTTGCTCGTTCTGGCATGAAGATTGGTCGTATTGAGGATGTGACTCCAATTCCCACCGACAGTACACGTAGAAAGGGTGGAC
GCAGAGGAAGAAGACTTTGATTTCCCAATGAGATTCGTCATCTTTCAGTTGTGCTCTTGACTCTTGTGAGGGCTACACACTTGCGA
AGTTGGTTTTTGTCTCTCTCTCTCCAGTTTATCTTTCAAGTTGCTTCGTAAAAACACTATAAGCTGTCTTTCTTCGACTTTGTAAA
CTTTTGCATTTTGGAGTTTTGGGAATGAAAAAAAAGTGTTAGTGACTAATGACGATTGTGTTTATTGTTAATTGGCTATATATTTA
TATAGCTATTTTGCATTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAO41731 cytoplasmic ribosomal protein S14 [Brassica napus]7592e-078
ADV38313 putative ribosomal protein S14 [Wolffia arrhiza]7412e-076
NP_187758 40S ribosomal protein S14-2 [Arabidopsis thaliana]7403e-076
XP_002884849 40S ribosomal protein S14 [Arabidopsis lyrata subsp. lyrata]7341e-075
NP_190826 40S ribosomal protein S14-3 [Arabidopsis thaliana]7332e-075

Swiss-Prot top hits (Blast detail)Scoree value
Q9CAX6 40S ribosomal protein S14-27401e-077
P42036 40S ribosomal protein S14-37338e-077
Q9SIH0 40S ribosomal protein S14-17321e-076
P19950 40S ribosomal protein S147086e-074
P19951 40S ribosomal protein S147051e-073

TrEMBL top hits (Blast detail)Scoree value
Q84X98 Cytoplasmic ribosomal protein S147591e-078
Q1H555 At3g115107402e-076
B3TM39 Ribosomal protein S147321e-075
A9PBW7 Predicted protein7312e-075
B4FBS3 40S ribosomal protein S147312e-075

Arabidopsis top hits (Blast detail)Scoree value
AT3G11510.1 40S ribosomal protein S14 (RPS14B)7418e-079
AT3G52580.1 40S ribosomal protein S14 (RPS14C)7345e-078
AT2G36160.1 40S ribosomal protein S14 (RPS14A)7337e-078

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  50%
 
123  38%
 
101  13%

Unigene MembersMember information