Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN39432

FASTA Sequence
Unigene ID: UN39432Length: 919 SSR 
GTTTTCATTTCCTTTCAGTCTCTAAGGGAAAGGGAGAACGTAATTTTACAAAGGCAAGCAAACAAACAAGGGTCCTTTGAGACATG
AATTACATTGGAGGATAAAGTGGTTTCAGGTTCTTAGCTTTATGCTCGAAGAAGACCAACCAGAGCTTTTTTATTAGATACAGCGA
GGGAAGAAGGTTTGACCAACATATCCACCGGTCATAGCTCTCCGCACATTGGTCTCAAAGAGCTTTGGGTTATCCCTTAAGACCTG
TGCAGCTTCATGGTTCAAAGGATCTTCAGAGTTGGGTTCGGTGAAAAGATGGAAGAGTCCATAGATGACAGTGTTAATGTTGAGAA
CAGGTTTCCAGTCTTCACGCAAGATGTTGAGGCAAACGTTTCCTTCCAAATCGATATTTGGATGATAAACCTTGGTTTTGCATTTA
ACTTTAGGAGCTTCATGAGGATACACAGGAGAGACTTGGAAGGTGAAAACAAACTTACCATTATGGTAGTAACCATCATCGGGTTT
AATGGAGACTTCAAAGTTCATCAAATCATCTTTGCCATTGGGAAATGATATCGTGCAAGAGCTTGGAAGGTTCAGCTCTGATATAT
CTTTGTGAAGACGAAGCTCACCAGCAGATTGCTTCTTAACGGAAGCTCCTCCTCCTCCTCCTCTACTAGCGTTCTGAGCTTGTTGT
TCCCTTTGCTTCTCCTTTACTTTAAACAGTCCAATCATTGCTTCTTCAAGAAAGTAACTCACACAACAGAAGTTTCTCAATTCTAT
AAGAACACACAGATGATCGGAAGAGACTACGACTGAATCAAAAGGGACGCCAATTCTATCTCTCTCACCCACCGGATTCTCGTTCC
TCTTCGGAAGCTAGACGACGACGAAGAATGTTGGATCTTTTAGCTTTTTTTTGTCGACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACI16426 RUB1-conjugation enzyme [Brassica juncea]9242e-097
BAJ33605 unnamed protein product [Thellungiella halophila]9204e-097
NP_001154289 NEDD8-conjugating enzyme Ubc12 [Arabidopsis thaliana]9196e-097
XP_002525098 ubiquitin-conjugating enzyme m, putative [Ricinus communis]8425e-088
ACU13172 unknown [Glycine max]8319e-087

Swiss-Prot top hits (Blast detail)Scoree value
Q9SDY5 NEDD8-conjugating enzyme Ubc129193e-098
Q9ZU75 Probable NEDD8-conjugating enzyme Ubc12-like8153e-086
A3KN22 NEDD8-conjugating enzyme Ubc126083e-062
P61081 NEDD8-conjugating enzyme Ubc126083e-062
P61082 NEDD8-conjugating enzyme Ubc126083e-062

TrEMBL top hits (Blast detail)Scoree value
B6E0M7 Ubiquitin carrier protein9241e-097
B9SGH9 Ubiquitin carrier protein8423e-088
C6SV99 Ubiquitin carrier protein8316e-087
A9PAZ9 Ubiquitin carrier protein8244e-086
A5AHT5 Ubiquitin carrier protein8138e-085

Arabidopsis top hits (Blast detail)Scoree value
AT4G36800.1 RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase9202e-099
AT4G36800.2 RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase9202e-099
AT2G18600.1 RUB1-conjugating enzyme, putative8162e-087
AT5G56150.1 UBC30 (ubiquitin-conjugating enzyme 30); ubiquitin-protein ligase2436e-021
AT5G56150.2 UBC30 (ubiquitin-conjugating enzyme 30); ubiquitin-protein ligase2436e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  100%

Unigene MembersMember information