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Information for unigene UN39435

FASTA Sequence
Unigene ID: UN39435Length: 1615 SSR 
AGGGGGGCGTGTTCATCATCTCTCTCTCTCAATCTCTTTTCTCGACGAGACTTTCTGGATCAAGCATGGATGAAGAGTACGAGGTT
ATCGTTCTCGGCACCGGTCTCAAGGAGTGTATCCTCAGCGGTCTCCTCTCCGTCGATGGCGTCAAGGTGCTTCACATGGACAGGAA
TGATTACTATGGTGGTGAATCAACATCTCTTAATCTCAACCAGCTTTGGAAGAAGTTCAAGGGAGAAGACAAGGCTCCTGAGCATT
TAGGTGCTAGCAGGGACTACAATGTTGACATGATGCCTAAGTTTATGATGGGAAATGGCAAGCTTGTGCGTACCCTTATTCACACG
GACGTTACAAAGTACTTGTCGTTTAAAGCCGTTGATGGAAGCTATGTCTTCGTTAAAGGCAAGGTTCAAAAGGTGCCAGTGACTCC
TATGGAGGCCCTGAAGTCTCCTCTCATGGGTATTTTTGAGAAACGTCGAGCTGGAAAGTTCTTCAGTTATGTTCAGGATTACGACG
AGAAGGACCCCAAGACACACAACGGGATGGATTTGACCAGACTTACAACCAAGGAACTGATTGCGAAATTTGGTCTTGATGAGAAC
ACTATTGACTTTATTGGTCACGCAGTGGCACTTCACACCAATGACCAACATCTCAATCAACCCGCCTTGGATACTGTGATGAGAAT
GAAGCTCTATGCGGAGTCTCTTGCACGTTTCCAAGGAACCTCTCCATATATTTATCCTCTCTATGGGTTGGGAGAACTCCCTCAGG
CATTTGCACGACTTAGTGCTGTCTATGGTGGCACATACATGTTGAACAAACCTGAGTGCAAGGTAGAGTTTGACGAAGAAGGTAAG
GTTACTGGTGTAACATCTGAGGGAGAGACTGCAAGATGCAAAAAGATTGTCTGTGACCCTTCTTACCTGCCCAACAAGGTTAGAAA
GATTGGAAGGGTTGCTCGGGCCATTGCTATTATGAGCCACCCTATTCCAAACACCAATGACTCTCACTCGGTTCAGGTCATCATAC
CTCAGAAGCAGTTGGCCCGTAAATCAGACATGTATGTGTTCTGCTGTTCGTACTCCCACAACGTTGCTCCCAAGGGAAAGTTCATC
GCATTTGTGTCGACAGATGCAGAGACTGATAACCCTCAAACTGAACTGAAGGCTGGAATTGATTTGTTGGGTCCTGTTGATGAGAT
ATTTTTCGACGTCTATGATAGATATGAGCCTGTCAACGAGCCTGAGTTGGACAACTGCTTTATATCAACCAGCTATGATGCTACAA
CTCACTTCGAGACAACCGTTGCTGATGTGTTGAACATGTATACTCTAATCACTGGAAAGCAACTGGACCTAAGTGTGGATCTGAGT
GCAGCAAGTACTGAAGAGGAATGAGGGAACCACCGGTTCGCTCTCTCTAGTTGTTGTTTCGACTCTTGCTTTTGTGTTTTTCTTCT
TTTTTTCTCTTTTGGGTTTGAAAGACCAAACAAGACCAGTGCTCATGATAGTTCCCCTTAATGTTGAATTCGGTTAAGACTTCTTC
TTTGTCATTACTTTGTGTTCACTTATTACTCTCGTTATTGTTTTCTGAATACAAACGTGTTTCAATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876528 ATGDI2 [Arabidopsis lyrata subsp. lyrata]22381e-249
NP_191551 RAB GDP dissociation inhibitor 2 [Arabidopsis thaliana]22282e-248
BAF81523 GDP dissociation inhibitor [Brassica rapa]21663e-241
XP_002880083 ATGDI1 [Arabidopsis lyrata subsp. lyrata]21548e-240
NP_181938 guanosine nucleotide diphosphate dissociation inhibitor 1 [Arabidopsis thaliana]21459e-239

Swiss-Prot top hits (Blast detail)Scoree value
P21856 Rab GDP dissociation inhibitor alpha13041e-142
P50398 Rab GDP dissociation inhibitor alpha13032e-142
O97555 Rab GDP dissociation inhibitor alpha13013e-142
P31150 Rab GDP dissociation inhibitor alpha13013e-142
P60028 Rab GDP dissociation inhibitor alpha13013e-142

TrEMBL top hits (Blast detail)Scoree value
O24653 AtGDI222281e-248
A8CF56 GDP dissociation inhibitor21662e-241
Q96254 At2g44100/F6E13.2321456e-239
Q96284 GDP-associated inhibitor21402e-238
Q8LBY8 GDP dissociation inhibitor21341e-237

Arabidopsis top hits (Blast detail)Scoree value
AT3G59920.1 ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2); RAB GDP-dissociation inhibitor22296e-251
AT2G44100.1 ATGDI1 (ARABIDOPSIS THALIANA GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1); RAB GDP-dissociation inhibitor21453e-241
AT2G44100.2 ATGDI1 (ARABIDOPSIS THALIANA GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1); RAB GDP-dissociation inhibitor20891e-234
AT5G09550.1 RAB GDP-dissociation inhibitor18561e-207
AT3G06540.1 GDP dissociation inhibitor family protein / Rab GTPase activator family protein1345e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  40%
 
191  10%
 
74  40%
 
91  10%

Unigene MembersMember information