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Information for unigene UN39471

FASTA Sequence
Unigene ID: UN39471Length: 745 SSR 
GGGCGTCCGTCTCTCTTCACTTGTTATCTTCTTCCAGTCCTTCGTAGGGAAACAGGAACCCTAATCATCAAATCTCAAGATGAATC
GTGAGAAGTTGATGAAGATGGCTAACACTGTCCGCACTGGCGGAAAGGGTACTGTTAGAAGAAAGAAGAAGGCTGTGCACAAGACC
AATACTACCGATGACAAGAAGCTTCAAAGCACCTTAAAGAGAATTGGAGTTAACTCTATTCCTGCTATTGAGGAAGTTAACATCTT
CAAGGATGATGTTGTTATTCAGTTCATCAACCCTAAAGTGCAAGCTGCAGTTGGTGCAAACACATGGGTTGTTAGCGGTTCTCCTC
AGACCAAAAAATTGGAAGATATCCTTCCTCAGATTTTCAGCCATCTCGGACCAGACAACATGGAGAATCTGAAGAAGCTAGCAGAG
CAGTTCAAGAAGCAATCTCCTGGTGGAGGCAATGTCCCAGCAACCATACAAGAGGATGATGAGGACGACGATGATGTCTCGGATCT
TGTAGCTGGTGAGACTTTCGAAGCCGCCGCTGAAGAGAAAGTAGCTGCTGCTCCTTCTTCTTAAGGCAAAAGAGCGAGAGACCACA
ACAACAACAACAAAACCGCACTTGAATTATATTACATATCTTTATAATTTTGCTTGTTCGCTCTATCCTCTTTTTGTAGTGTTTCC
TACCAGATTCTTGTTTCCCAGATAATGATTTAAAAGTTTTTATCCAGTTGATCTGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34579 unnamed protein product [Thellungiella halophila]7223e-074
XP_002892972 hypothetical protein ARALYDRAFT_312752 [Arabidopsis lyrata subsp. lyrata]7043e-072
NP_177466 nascent polypeptide-associated complex subunit beta [Arabidopsis thaliana]6982e-071
AAM61406 putative transcription factor BTF3 (RNA polymerase B transcription factor 3) [Arabidopsis thaliana]6945e-071
BAH20425 AT1G73230 [Arabidopsis thaliana]6936e-071

Swiss-Prot top hits (Blast detail)Scoree value
Q6PC91 Transcription factor BTF3 homolog 44003e-038
P20290 Transcription factor BTF33913e-037
Q96K17 Transcription factor BTF3 homolog 43895e-037
Q9CQH7 Transcription factor BTF3 homolog 43895e-037
Q5RC59 Transcription factor BTF3 homolog 43895e-037

TrEMBL top hits (Blast detail)Scoree value
Q9CAT7 Putative RNA polymerase B transcription factor 36981e-071
Q8LFH4 Putative transcription factor BTF3 (RNA polymerase B transcription factor 3)6943e-071
B9DI58 AT1G73230 protein (Fragment)6934e-071
Q9SMW7 BTF3b-like factor6828e-070
Q93ZB5 At1g17880/F2H15_106773e-069

Arabidopsis top hits (Blast detail)Scoree value
AT1G73230.1 nascent polypeptide-associated complex (NAC) domain-containing protein7032e-074
AT1G17880.1 nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative6862e-072

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information