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Information for unigene UN39487

FASTA Sequence
Unigene ID: UN39487Length: 974 SSR 
AGAGAGAGAGAGAGAGAGAGCATATACAAAACAAAAAAAACACCCTAGCCAAAGTTGGAGAAGAAAGAAGAAAATGGAGCAGTCTT
ATGTGTATGCTTACCCACCAGGCACGGCTCCACCGCCTCCACAAGGCGGTGGCATCGCCGGAGTGATAGTGGATCCAAGGTTCTGT
GCTCCGTATCCCGTGGATCTGGCGATCGTGCGGAAGATGATGACGTTGACTGATGGTAACTTCGTTATAACGGACGTTAACGGGAA
CTTGCTGTTCAAGGTGAAGGAGCCAGTGTTTGGTCTTCATGACAAGAGGGTTTTATTGGATGGTTCTGGATCTCCTGTCTTGACTT
TGAGAGAGAAGATGGTGAGCTTGCACGACAGGTGGCAAGTATTTAGAGGAGGGAGTACGGAGCAGCGTGATCTGCTGTACACGGTT
AAGAGATCGTCGATGCTTCAGTTTAAGACCAAACTCGATGTGTTTTTGAGTCACAATAAGGATGAGAAGAGATGTGATTTTAGGGT
CAAAGGGAGCTGGTTCGAGCGCTCTTGTGTCGTCTATGCCGGCGAATCTGACGCCATCGTTGCCCAAATGCACAAGAAGCACACGG
TGCAGAGCGTGTTCTTGGGAAAAGACAATTTCTCGGTGACTGTTTATCCAAACGTGGACTATGCCTTCATTGCCTCTCTCGTCGTC
ATTCTCGATGATGTTAACCGAGAAGACCGTGCCGCAGGCAGCAGCTGATCAGATCAGACGTGCGTGTGTGTGTTGTGTGTGTGTGA
GAGAGAGAGAGCTTGCTCGCTCGCTTGCTCACGTATTAGTTATGCTTTTGGCTTTGTATTGTACCTATATTCTCTAAACTTTGCAC
TTTGGAAGGTGGACTTGTTCTTTGTGTGATCTTTCCAGTTGTAAAATAATACAAATGTATGTATTGTTAGCCGTCACTTACTTTCT
TACATAAATATTACTATATGTTATGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872996 hypothetical protein ARALYDRAFT_486891 [Arabidopsis lyrata subsp. lyrata]10253e-109
NP_850751 LURP-one-related 15 protein [Arabidopsis thaliana]10164e-108
1ZXU Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At5g017509752e-103
AAM62599 unknown [Arabidopsis thaliana]7898e-082
NP_568095 LURP-one-related 15 protein [Arabidopsis thaliana]7834e-081

Swiss-Prot top hits (Blast detail)Scoree value
Q9LZX1 UPF0706 protein At5g0175010162e-109

TrEMBL top hits (Blast detail)Scoree value
Q9LQ36 F14M2.3 protein7261e-074
C6TBB0 Putative uncharacterized protein7242e-074
C6T3J7 Putative uncharacterized protein6784e-069
C6T393 Putative uncharacterized protein6767e-069
Q8VYP1 Putative uncharacterized protein At2g145606515e-066

Arabidopsis top hits (Blast detail)Scoree value
AT5G01750.2 unknown protein10161e-110
AT5G01750.1 unknown protein7831e-083
AT3G11740.1 unknown protein7688e-082
AT1G33840.1 unknown protein6657e-070
AT2G14560.1 LURP1 (LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA)6442e-067

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  33%
 
116  67%

Unigene MembersMember information