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Information for unigene UN39555
| FASTA Sequence |
| Unigene ID: UN39555 | Length: 894 |
SSR | SNP | GGAATCAATAGAATCCCCACGACGACGACGACGATGGCTTCTCTCGCGACTTCCATTGCCGGAGCTGGAACCTCCAAGATTCTCGT
TTCATCATCTTCAAAGAGAATTGGGTTTCCCAACTCGAGAGTCTTCTTCCTTTTCGCTAGACCGATCTCTAAAAGTGGGATCTTTC
CCCGATCGGCGATACACGCTTCGAGCCAAGAGGAAACAAAGGCTTCACCTTTCGCGTCCGTTGCGTCACCACCGGGTCTATACTCT
GCTCAGACTTTCGATTTGACTCCTCAAAACGTCGACTTGGTCCTCGAAGATGTCAGGCCGTTCCTTATCTCTGATGGTGGGAACGT
CGACGTTGTCTCTGTTGAAGACGGCGTCGTTTCTCTCAAACTCCAAGGAGCATGTACTAGCTGTCCGAGTTCTTCAACAACCATGA
CGATGGGAATCGAAAGGGTACTCAAAGAGAAGTTTGGAGATGCTTTGAAAGATATTCGACAAGTTTTTGATGAAGAAGTTAAGCAT
ATAACCGTGGAGGCAGTGAATGCTCATCTTGATATACTGAGACCAGCGATCAAGAACTATGGTGGAAGCGTGGAAGTTTTATCAGT
TGAAGGTGAAGACTGTGTTGTCAAGTACGTTGGACCTGAATCGATTGGAATGGGAATTAAAGCAGCGATTAAAGAAAAGTTCAAGG
ACATATCTAATGTTACCTTTACAAGCTAGAAACTGTATATGTAAAAAAAAACACAAAGTTGCTCTTTGTTTAAGCTTATTTCATTT
TGTAATGTCCACATCACTAGTAGTCCCCCTAGCTATCTTGCAAAGTTGATCAAGGACAGTGTGTAGACAAAGAAGCAAGTTGTTTT
CCAAGTCACCAGAAAATAAAAAGAACACTGTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567219 NifU-like protein 1 [Arabidopsis thaliana] | 887 | 3e-093 |
| XP_002278510 PREDICTED: hypothetical protein [Vitis vinifera] | 666 | 1e-067 |
| ACU16433 unknown [Glycine max] | 652 | 5e-066 |
| XP_002515241 Nitrogen fixation protein nifU, putative [Ricinus communis] | 645 | 3e-065 |
| BAJ90385 predicted protein [Hordeum vulgare subsp. vulgare] | 635 | 5e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93W77 NifU-like protein 1, chloroplastic | 887 | 1e-094 |
| Q93W20 NifU-like protein 2, chloroplastic | 255 | 2e-021 |
| Q84RQ7 NifU-like protein 3, chloroplastic | 234 | 7e-019 |
| Q84LK7 NifU-like protein 1, chloroplastic | 223 | 1e-017 |
| O32119 Putative nitrogen fixation protein yutI | 173 | 8e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6T431 Putative uncharacterized protein | 652 | 3e-066 |
| B9RNA2 Nitrogen fixation protein nifU, putative | 645 | 2e-065 |
| B9GSW6 Predicted protein | 629 | 2e-063 |
| C5X1V6 Putative uncharacterized protein Sb01g037130 | 628 | 2e-063 |
| C0P617 Putative uncharacterized protein | 619 | 2e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G01940.1 NFU1; structural molecule | 888 | 9e-096 |
| AT5G49940.1 NFU2 (NIFU-LIKE PROTEIN 2); structural molecule | 255 | 2e-022 |
| AT4G25910.1 NFU3; structural molecule | 234 | 6e-020 |
| AT5G49940.2 NFU2 (NIFU-LIKE PROTEIN 2); structural molecule | 214 | 1e-017 |
| AT1G51390.1 NFU5; ATP binding / structural molecule | 136 | 1e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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