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Information for unigene UN39578

FASTA Sequence
Unigene ID: UN39578Length: 740 SSR 
GGACACTCATCAATCATCATCGGCTAAGAGAGAGAGAGAAAAAAAAAAAAAAAAAAAAAAAAGACAAGAGAGAGAGAAAAGAGAGA
GAGAAATGGAGGGGAAGAAGATAGGGAGGAGATTGGAAGGAAAGGTGGCGATAGTAACGGCCTCGACGCAAGGGATCGGCTTCGGT
ATCATCGAGCGTTTCGGTCTCGAAGGCGCTTCCGTCGTCGTTTCTTCCCGCAAGCAGGCAAATGTTGAGGAAGCAGTAGAAAAGCT
CAAATCCAAAGGGATCGATGCTTATGGAATCGTCTGTCATGTTTCCAATGCTCAACATCGCCGAGATCTTGTCGAAAAAACTGTTC
AGAAATATGGAAAGATAGATATCGTTGTCTGTAACGCCGCTGCTAATCCATCTACGGACCCGATCTTGTCCACCAAAGAAGCTGTC
CTCGACAAGCTTTGGGAAATCAATGTCAAATCCTCTATACTTCTCCTTCAGGATATGGCTCCTCACTTAGAGAAGGGTTCTTCTGT
TATCTTCATTACTTCCATCGCTGGATTTCAACCACAAGGTTCCATGGCTATGTATGGTGTCACTAAGACTGCTCTTCTCGGACTAA
CCAAGGCTCTTGCTGCTGAGATGGGTCCGGACACACGTGTCAACGCGGTTGCTCCCGGTTTTGTGCCCACACACTTTGCTTCTTTC
ATCACCGGAAACTCCCAAGTGAGGGAGAGCATCGAAGAGAAGACTCTGCTTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874790 short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]10082e-107
NP_567300 dehydrogenase/reductase SDR family member 4 [Arabidopsis thaliana]9983e-106
XP_002264497 PREDICTED: hypothetical protein [Vitis vinifera]8649e-091
CBI35708 unnamed protein product [Vitis vinifera]8649e-091
ABZ02330 short chain alcohol dehydrogenase [Arabidopsis halleri]8522e-089

Swiss-Prot top hits (Blast detail)Scoree value
Q13268 Dehydrogenase/reductase SDR family member 24577e-045
Q9BTZ2 Dehydrogenase/reductase SDR family member 44523e-044
Q5RCF8 Dehydrogenase/reductase SDR family member 44504e-044
Q8WNV7 Dehydrogenase/reductase SDR family member 44325e-042
Q8SPU8 Dehydrogenase/reductase SDR family member 44309e-042

TrEMBL top hits (Blast detail)Scoree value
Q9S9W2 AT4g05530 protein9982e-106
B1P4A6 Short chain alcohol dehydrogenase (Fragment)8522e-089
B1P4A7 Short chain alcohol dehydrogenase (Fragment)8522e-089
B1P4C5 Short chain alcohol dehydrogenase (Fragment)8485e-089
B1P4C8 Short chain alcohol dehydrogenase (Fragment)8476e-089

Arabidopsis top hits (Blast detail)Scoree value
AT4G05530.1 IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1); binding / catalytic/ oxidoreductase9981e-108
AT3G05260.1 short-chain dehydrogenase/reductase (SDR) family protein2417e-021
AT1G54870.1 binding / catalytic/ oxidoreductase2301e-019
AT2G29340.2 short-chain dehydrogenase/reductase (SDR) family protein2157e-018
AT2G29340.1 short-chain dehydrogenase/reductase (SDR) family protein2157e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information