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Information for unigene UN39594

FASTA Sequence
Unigene ID: UN39594Length: 829 SSR 
TTTACTTTTCTAGCTCGCTCTTTGAAAATTCTCACATCTCTCTCTCTCTATATATCACTTTACATAAACCACTATCCAACACACAC
CCCTTTTCTCTTTAGCTCAATCTCCCATGATGGCTTCTTCACAAGATCTCCTTTTGCTCACACTGTCTATGGTGTTAATCCCCTTC
TCTTTAGCTCAATCTCCCATGATGGCCCCTTCCGGCTCAATGTCCATGCCACCAATGCCTAGCGGCGGCTCTCCAATGCCAGTGAT
GACTCCACCACCTATGCCTATGATGACTCCACCACCTATGCCTATGGCGCCACCACCTATGATGACTCCACCACCTATGCCTATGG
CGCCACCACCTATGCCCATGACTCCACCACCTATGCCTATGGCTCCACCACCAATGTCCATGGCTACACCACCAATGATGCCAATG
ACTCCATCTTCAAGCCCAATGAGCCCACCAACTACTCCTATGAGCCCAGGCCCTAGCCCAACAACTGTCCCCGATATGACTTCGCC
ACCGATGCCAGCAATGGAATCTTCTCCTTCTCCGGGACCAGGACCCATGCCACCGGCTACGGCCTCGCCGGGGGATTCCGGAGCTT
TCAATGTAAGAATCGACGTCATGGCACTTTCTTTCCTCTTTGCAGCCCATTTGCTCCTCGTTTGAGATTATTACTGAGCGTCGTTT
TCGTGTAATTTACTTTAATTATTCTTCGAGCCATCATATTTGAGTTTGTGTTTGATATGTACGATTCAGACATTTGTTTGCTTTAT
CAATCTATCGTTGACTCTAGTTGGTGTATGTGATGTAAACTTATATTGTCTATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAC82613 hypothetical protein [Capsella rubella]4652e-044
ACG43263 hypothetical protein [Zea mays]3282e-028
NP_193431 arabinogalactan family protein [Arabidopsis thaliana]3245e-028
A71438 probable resistance protein - Arabidopsis thaliana3245e-028
NP_001183334 hypothetical protein LOC100501738 [Zea mays]3245e-028

Swiss-Prot top hits (Blast detail)Scoree value
Q9FPQ6 Vegetative cell wall protein gp12661e-022
P41479 Uncharacterized 24.1 kDa protein in LEF4-P33 intergenic region2373e-019
Q9LJ64 Pollen-specific leucine-rich repeat extensin-like protein 12364e-019
O10341 Uncharacterized 29.3 kDa protein2321e-018
Q9FLQ7 Formin-like protein 202078e-016

TrEMBL top hits (Blast detail)Scoree value
Q93YI5 Putative uncharacterized protein4651e-044
B6U1N0 Putative uncharacterized protein3281e-028
C4J5K1 Putative uncharacterized protein3243e-028
Q9FT76 Putative uncharacterized protein3243e-028
Q8LBV1 Putative uncharacterized protein3163e-027

Arabidopsis top hits (Blast detail)Scoree value
AT4G16980.1 arabinogalactan-protein family5132e-052
AT1G68725.1 AGP19 (ARABINOGALACTAN-PROTEIN 19)2552e-022
AT1G44191.1 Encodes a ECA1 gametogenesis related family protein2418e-021
AT2G14890.2 AGP9 (ARABINOGALACTAN PROTEIN 9)2363e-020
AT2G14890.1 AGP9 (ARABINOGALACTAN PROTEIN 9)2363e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
198  67%
 
184  33%

Unigene MembersMember information