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Information for unigene UN39607

FASTA Sequence
Unigene ID: UN39607Length: 1493 SSR 
GTTTACTCTCTCTCTCTCTCTCTCACTTTCCCTTTTCTCCTCTACCTCCATTTTCAGTTCCCCAGAGGAAGAATCTTTTTGCTTCC
AAGTCCCAAGATGCACGGCAAAACAGATTCCGAGGTGACGAGCATCGCCGCCTCGTCGCCAGCCAGATCTCCACGCCGACCAGTCT
ACTACGTCCAATCGCCGTCTCGCGACTCTCACGACGGAGAGAAAACAGCAACCTCCTTCCACTCAACTCCCGTGCTCAGCCCGATG
GGATCTCCGCCGCACTCACAGTCCTCCATGGGCCGCCACTCGCGAGAATCCTCCTCGACCCGGTTCTCCGGGTCCTTAAAACCCGG
GTCCCGGAAAGTCAACGACAGCTCGACGAAGCGGAAAGGACACGGACACGGCGGAGAGAAGCAGTTCGCGATGATCGAAGAGGAAG
GGCTGTTAGACGACGGAGAGAGAGATCGTGATACGCTTCCTCGTCGGTGCTATGTCTTAGCCTTCGTCGTTGGATTCTTCATACTC
TTTGGTCTCTTCTCTTTGATTCTTTACGGTGCTGCTAAACCTCAGAAACCAAAGATAACCGTCAAGAGTATAACATTCGAGACGCT
CAAGATCCAAGCTGGTCAAGATGCTGGTGGTGTCGGAACCGATATGATCACCATGAACGCGACTCTTAGAATGTTGTATCGAAACA
CTGGAACTTTCTTTGGTGTCCATGTAACTTCAACTCCTGTCGATCTCAGTTTCTCTCAGATGAAAATCGGCTCCGGTTCTATTAAG
AAGTTTTATCAGTCAAGGAAGAGCGAGAGAACGGTATTGGTACACGTGATCGGAGAGAAGATTCCTTTATACGGAAGTGGCGCGAC
ATTGATACCGCCGGCGCCTCCAGCTCCACTTCCGAAACCTAAAAAGAAGAAGAAAGGAGCTCCGGTTGTTATTCCTGACCCGCCCG
CACCTTCTGCACCGGTTCCTATGAGACTCAGTTTCGTTGTTCGATCACGAGCTTACGTGTTGGGGAGGTTAGTGAAGCCCAAGTTC
CTCAAGAAGATCGAGTGTGACATCAACTTCGAACACAAGAAGCTCAATAAGCATATACCTATCACCAAGAATTGCACCGTCACTAC
TGTTTGATTTGAAGAACCATTTTTAGTGAGGAAAAAAAGGATGTCGTATAAGGGTAACGTGATTACAGCTCTACGGTCAGTATTTT
GGGTTCTCTGGGCAGCGCGTTGAAGGTAACGAATGAAAAACTGTCGGTGGCTTTAGTTTACTTGAGTGGTTGGTTTTGGACCTTTG
TGATTAGTTATTTTATTTTATCTGTGAAAAGAATTTAAAATTGTGTGGAGAATATATTAATTCATTTGTTTCCTTTTTCTTTTTCT
TTTTGTTTACAGAATATATTAATTCATTTGTTTTGATGCAATGGTGGACAATACTTATCTATTTTGTTAAAATTGAAACTTAAATT
TATACTAATTGTTGACCAAAAGTTTCATAAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891325 hypothetical protein ARALYDRAFT_473858 [Arabidopsis lyrata subsp. lyrata]15614e-171
NP_564495 uncharacterized protein [Arabidopsis thaliana]15552e-170
NP_199100 uncharacterized protein [Arabidopsis thaliana]10623e-113
XP_002863727 hypothetical protein ARALYDRAFT_494732 [Arabidopsis lyrata subsp. lyrata]10614e-113
AAO42869 At5g42860 [Arabidopsis thaliana]10571e-112

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9C636 Putative uncharacterized protein15551e-170
Q9FMN3 Emb|CAB53482.110622e-113
Q84VY4 At5g4286010578e-113
Q3ECW4 Putative uncharacterized protein At1g45688.210156e-108
B9GNU7 Predicted protein9815e-104

Arabidopsis top hits (Blast detail)Scoree value
AT1G45688.1 unknown protein15566e-173
AT5G42860.1 unknown protein13371e-147
AT1G45688.2 unknown protein10153e-110
AT4G35170.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: stem, carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Harpin-induced 1 (InterPro:IPR010847); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41990.1); Has 82 Blast hits to 81 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3568e-034
AT2G41990.1 unknown protein2913e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
215  45%
 
182  18%
 
192  18%
 
202  18%

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