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Information for unigene UN39643
| FASTA Sequence |
| Unigene ID: UN39643 | Length: 687 |
SSR | | GGGCGGAGAAATTAAAGAAGAAGCTGAAGAAAAAATTATCGGTGTGCTTCTATGGCGATGACAGTAGCAGCTTCGTCCTCTGTGGC
AGTCATGATGCCACGTGTCCATTCCGTATCTGCCCGCTTCTCAGCCGTTCCTTACCTTCCTCCTCGCTCTTTTGGCCGATCCTCTT
TCACTGTTCCGGTGAAGCTACTTTCAGGGAATGGTTTACACAAGGTTGAATCGATGAAGACGAGAGCTTCTTCGTCAGAAGATACA
TCAGCATCCATTGACACCAACGAAATCTTCACAGACTTGAAGGAAAAGTGGGATGGTCTTGAAAACAAGTCAACTGTAATAATCTA
TGGAGGAGGAGCTGTTGTTGCTGTTTGGTTATCTTCCATTGTTGTTGGTGCCATCAACTCTGTTCCTCTGCTTCCAAAGGTGATGG
AACTTGTTGGTCTTGGGTACACAGGATGGTTCGTCTACAGATACCTTCTCTTCAAGTCAAGCAGAAAGGAGTTGGCTGAGGATATT
GATTCCTTGAAGAAGAAGATCGCTGGGACCGAATAGATTCTTTCAAAAAATATAAACCAGCTTTCTCTATGGGATTTTCCTGTAAT
ATGATATGTTATACAATATATATATATATATTTCAACAATGTATCTTCTGCGGTCTGAAACTATTCTCTTAGATCCAAAAAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACF23021 ST6-40 [Eutrema halophilum] | 723 | 2e-074 |
| NP_567210 uncharacterized protein [Arabidopsis thaliana] | 703 | 4e-072 |
| AAB00107 unknown [Arabidopsis thaliana] | 700 | 8e-072 |
| XP_002874994 hypothetical protein ARALYDRAFT_912116 [Arabidopsis lyrata subsp. lyrata] | 691 | 9e-071 |
| ABK95729 unknown [Populus trichocarpa] | 520 | 6e-051 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04616 Uncharacterized protein At4g01150, chloroplastic | 712 | 2e-074 |
| Q8LCA1 Thylakoid membrane phosphoprotein 14 kDa, chloroplastic | 200 | 4e-015 |
| Q119Z5 Glutamyl-tRNA synthetase | 141 | 3e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B4YYA4 ST6-40 | 723 | 1e-074 |
| A9PH76 Putative uncharacterized protein | 520 | 4e-051 |
| B9GQF8 Predicted protein (Fragment) | 513 | 3e-050 |
| B7FGQ4 Putative uncharacterized protein | 510 | 6e-050 |
| B9I8T5 Predicted protein | 509 | 8e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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