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Information for unigene UN39680
| FASTA Sequence |
| Unigene ID: UN39680 | Length: 718 |
SSR | | GGAAAGACTCTCTCTCTCTCTCTCTCTCTGTCTTTAGCGATTAAAGCAAGCGTAGATCAGATGGCAGCACCTTTCACGTTGAGGAA
GATCGGAGTTCCGCCGAACTCAGCTAACCTCACGGAGGCTCGCCGCCGTGTTTTCGATTACTTCAGAGCTGCATGTAGATCCATCC
CCACCATCATGGACATTTACAATCTACAAGACGTCGTCGCGCCTTCTCAGCTACGTTTCGCAATCTCTGCTCAGATTCGTAAAAAC
GCTCACGTCACCGATCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGAAGAGCTGACTGACATAGTGGATCACGCAAAGCA
GCGTCACCACATTATTGGTCAATACGTGGTGGGTGAAGGGCTAGTCCAGAATACTGGAAGCAAGGATCAAGGGAAGTCTGATTTTC
TCAAGAACTTCTACACCAGCAACTACTTTTGAGCTGGTGACTGTTTTCTCTACTGGCTTTGTCATGCTACCAAGTTCCGTATAAGT
CTTTTCCAGTATTGAATTTTCGACTTAGGAAGAAGTCTTCTTCCTGAGAATAATTTGTATGAATTTCGCCAAACCTCTCTTTAAGT
TGTAGCTGTGACAGTGTTTGCTGTACAATTATTGCTATGATTTCAAGATACATAATCAGCTCTTTTTTCCTTCAAAAGTAAACTGA
ATGTTTCTTTGACTTATTATGATCATCATA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884895 complex 1 family protein [Arabidopsis lyrata subsp. lyrata] | 665 | 1e-067 |
| NP_566416 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 6 [Arabidopsis thaliana] | 660 | 4e-067 |
| XP_002457883 hypothetical protein SORBIDRAFT_03g018290 [Sorghum bicolor] | 505 | 4e-049 |
| NP_001132752 hypothetical protein LOC100194239 [Zea mays] | 485 | 8e-047 |
| XP_002513026 NADH dehydrogenase, putative [Ricinus communis] | 477 | 7e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q02366 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | 160 | 2e-010 |
| Q9CQZ5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | 155 | 7e-010 |
| Q0MQA4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | 147 | 6e-009 |
| P56556 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | 147 | 6e-009 |
| Q0MQA5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | 147 | 6e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9LHI0 Genomic DNA, chromosome 3, P1 clone: MQC3 | 660 | 3e-067 |
| C5XLB7 Putative uncharacterized protein Sb03g018290 | 505 | 3e-049 |
| B4FHZ4 NADH ubiquinone oxidoreductase B14 subunit | 485 | 5e-047 |
| B9RG74 NADH dehydrogenase, putative | 477 | 5e-046 |
| A2YP57 Putative uncharacterized protein | 473 | 1e-045 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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