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Information for unigene UN39713

FASTA Sequence
Unigene ID: UN39713Length: 703 SSR 
GGGCCCGCGTCTATAGTCAGTCACTTGTTATCTCCTTCCACTCTCTGAAGAAACCAGAACCCTAATCATCAAATCTCTCAAGATGA
ATCGTGAGAAGTTGATGAAGATGGCTAACACTGTCCGCACTGGCGGAAAGGGTACTGTTAGAAGAAAGAAGAAGGCTGTGCACAAG
ACCAATACTACTGATGACAAGAAGCTCCAAAGCACTCTCAAGAGAATTGGAGTTAACTCTATTCCTGCTATTGAAGAAGTAAACAT
CTTCAAGGATGATGTTGTCATTCAGTTCATCAACCCTAAAGTGCAAGCTGCAGTTGGTGCAAACACATGGGTTGTTAGCGGTTCTC
CTCAGACCAAAAAATTGGAAGATATCCTTCCTCAGATTTTCAGCCATCTCGGACCAGACAACATGGAGAACCTGAAGAAGTTAGCA
GAGTAGTTCAAGAAGCAATCTCCTGGTGGAGGTAATGTCCCAGCAACCATTCAAGAGGATGATGAGGACGATGATGATGTCCCGGA
TCTTGTAGCTGGTGAGACTTTCGAAGCTGCCGCTGAAGAGAAAGTAGCTGCTGCTCCTTCTTCTTAAGACAAAAGAGCGAGACCAC
AACAACAACAACAAAACCGCACTTGAATTATTACATATCTTTATAATTTTGCTTGTTCGCTCTATCCTCTTTTTTGTAGTGCTTCC
GACCAGATTCTTGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34579 unnamed protein product [Thellungiella halophila]7213e-074
XP_002892972 hypothetical protein ARALYDRAFT_312752 [Arabidopsis lyrata subsp. lyrata]7034e-072
NP_177466 nascent polypeptide-associated complex subunit beta [Arabidopsis thaliana]6972e-071
AAM61406 putative transcription factor BTF3 (RNA polymerase B transcription factor 3) [Arabidopsis thaliana]6936e-071
BAH20425 AT1G73230 [Arabidopsis thaliana]6927e-071

Swiss-Prot top hits (Blast detail)Scoree value
Q6PC91 Transcription factor BTF3 homolog 43993e-038
P20290 Transcription factor BTF33904e-037
Q64152 Transcription factor BTF33904e-037
Q96K17 Transcription factor BTF3 homolog 43886e-037
Q9CQH7 Transcription factor BTF3 homolog 43886e-037

TrEMBL top hits (Blast detail)Scoree value
Q9CAT7 Putative RNA polymerase B transcription factor 36971e-071
Q8LFH4 Putative transcription factor BTF3 (RNA polymerase B transcription factor 3)6934e-071
B9DI58 AT1G73230 protein (Fragment)6925e-071
Q9SMW7 BTF3b-like factor6811e-069
Q93ZB5 At1g17880/F2H15_106764e-069

Arabidopsis top hits (Blast detail)Scoree value
AT1G73230.1 nascent polypeptide-associated complex (NAC) domain-containing protein7022e-074
AT1G17880.1 nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative6852e-072

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  100%

Unigene MembersMember information