![](/radish/img/header.png) |
Information for unigene UN39724
FASTA Sequence |
Unigene ID: UN39724 | Length: 1021 |
SSR | | GGATTTTAATAATATTGCAACTGTAAAGAGGAAAAAAGTATTAACCAGCCCGGATTCATATTCCCATAGAACAAGTGTAAGCCAAT
CTTTATTCGTTGTTTATAGGTTTGGCAAATAAATTACAACATGAAAGTTTTGTATGTGAATATTGCCTCTAAGAAGAGAAGAAATA
TCTTATTCATCTGTTGGCATCTTCAGAACCATAGCCTCACCATCCAATGGCGTGTATTCCGGCAAACTTACGTACTTGGGACATGA
TTTTTTCGACGTCAAGTCTTTTGAACCAACACAGTCCCTGGGCTTGAAATCCTTATAGAAGCATATACGTATTTCATCGATTGCAT
CTCTTTTGCATACTACTTCAGGGGTGATATGAAATGCATTCTGAATGGCTGTGACAATACCTCCTAGAGGATACTTCTCGCTGTTG
GAAGCAACATAGCCAGCTTTATAAAGGACATCCGTGACATTATGCTTGAAGTAGATATTAAGCGTGGTAACGAAGTAACTATACTC
ATCACGAATAACAGGAGAAGAGCAAGTCCCATGTTTCTCCCACTCATGGCCCCAAAATGATCCTTTTCCACCATGGCAAGATGATG
GAGAGCCACAACTGAGACTGGGCCAGTACTTTTCCATGCCATCCATCAACGTTGAGATCTGCAAATTTTTGTCTCCTATGAGAATC
TCCTTCTCATTGAAGTCGGATCTATAGCAACATGAAGGCCAGGAACCGTCGTTATAGTCCGGCCATAGTCCATGGATGGTGAATTG
AGTTGGAGTGTCCGAGCCTCTACAGCAAGCGTTTTTGGAGCAGCAATGGCGAGTTCCACGGCAGTAGGTTCCAGGCCATTGGAGAG
AGAGAGCGAAATAATCGAACTCTCTCTGTGAGCGATTGACTTCGACGACGTTGTCTCCGGCAAGTCTTCCAGTCTCCGCTAGATAG
GCCGAGACAGAAAGAACCGTAACCAAAAGGACTTGGAGGAGGAGGAGGAGGAGAAGAAGAGATCTACGCAACGCC
|
|
|
GenBank top hits (Blast detail) | Score | e value |
XP_002524581 ribonuclease t2, putative [Ricinus communis] | 880 | 2e-092 |
NP_030524 Ribonuclease 2 [Arabidopsis thaliana] | 839 | 1e-087 |
XP_002879817 hypothetical protein ARALYDRAFT_903231 [Arabidopsis lyrata subsp. lyrata] | 825 | 5e-086 |
ABK92675 unknown [Populus trichocarpa] | 643 | 7e-065 |
XP_002321228 predicted protein [Populus trichocarpa] | 642 | 9e-065 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P42814 Ribonuclease 2 | 839 | 6e-089 |
P42813 Ribonuclease 1 | 211 | 4e-016 |
Q38717 Ribonuclease S-4 | 208 | 8e-016 |
Q38716 Ribonuclease S-2 | 206 | 1e-015 |
P80022 Extracellular ribonuclease LE | 190 | 1e-013 |
TrEMBL top hits (Blast detail) | Score | e value |
B9SF12 Ribonuclease t2, putative | 880 | 2e-092 |
Q1ECE2 At2g39780 | 839 | 9e-088 |
B6TGK1 Ribonuclease 2 | 695 | 4e-071 |
A9P8H2 Putative uncharacterized protein | 643 | 5e-065 |
B9IAZ9 Predicted protein | 642 | 6e-065 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT2G39780.1 RNS2 (RIBONUCLEASE 2); RNA binding / endoribonuclease/ ribonuclease T2 | 839 | 5e-090 |
AT2G39780.2 RNS2 (RIBONUCLEASE 2); RNA binding / endoribonuclease/ ribonuclease T2 | 486 | 4e-049 |
AT2G02990.1 RNS1 (RIBONUCLEASE 1); endoribonuclease/ ribonuclease | 211 | 3e-017 |
AT1G14220.1 ribonuclease T2 family protein | 189 | 1e-014 |
AT1G26820.1 RNS3 (RIBONUCLEASE 3); RNA binding / endoribonuclease/ ribonuclease T2 | 169 | 3e-012 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|