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Information for unigene UN39724
| FASTA Sequence |
| Unigene ID: UN39724 | Length: 1021 |
SSR | | GGATTTTAATAATATTGCAACTGTAAAGAGGAAAAAAGTATTAACCAGCCCGGATTCATATTCCCATAGAACAAGTGTAAGCCAAT
CTTTATTCGTTGTTTATAGGTTTGGCAAATAAATTACAACATGAAAGTTTTGTATGTGAATATTGCCTCTAAGAAGAGAAGAAATA
TCTTATTCATCTGTTGGCATCTTCAGAACCATAGCCTCACCATCCAATGGCGTGTATTCCGGCAAACTTACGTACTTGGGACATGA
TTTTTTCGACGTCAAGTCTTTTGAACCAACACAGTCCCTGGGCTTGAAATCCTTATAGAAGCATATACGTATTTCATCGATTGCAT
CTCTTTTGCATACTACTTCAGGGGTGATATGAAATGCATTCTGAATGGCTGTGACAATACCTCCTAGAGGATACTTCTCGCTGTTG
GAAGCAACATAGCCAGCTTTATAAAGGACATCCGTGACATTATGCTTGAAGTAGATATTAAGCGTGGTAACGAAGTAACTATACTC
ATCACGAATAACAGGAGAAGAGCAAGTCCCATGTTTCTCCCACTCATGGCCCCAAAATGATCCTTTTCCACCATGGCAAGATGATG
GAGAGCCACAACTGAGACTGGGCCAGTACTTTTCCATGCCATCCATCAACGTTGAGATCTGCAAATTTTTGTCTCCTATGAGAATC
TCCTTCTCATTGAAGTCGGATCTATAGCAACATGAAGGCCAGGAACCGTCGTTATAGTCCGGCCATAGTCCATGGATGGTGAATTG
AGTTGGAGTGTCCGAGCCTCTACAGCAAGCGTTTTTGGAGCAGCAATGGCGAGTTCCACGGCAGTAGGTTCCAGGCCATTGGAGAG
AGAGAGCGAAATAATCGAACTCTCTCTGTGAGCGATTGACTTCGACGACGTTGTCTCCGGCAAGTCTTCCAGTCTCCGCTAGATAG
GCCGAGACAGAAAGAACCGTAACCAAAAGGACTTGGAGGAGGAGGAGGAGGAGAAGAAGAGATCTACGCAACGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002524581 ribonuclease t2, putative [Ricinus communis] | 880 | 2e-092 |
| NP_030524 Ribonuclease 2 [Arabidopsis thaliana] | 839 | 1e-087 |
| XP_002879817 hypothetical protein ARALYDRAFT_903231 [Arabidopsis lyrata subsp. lyrata] | 825 | 5e-086 |
| ABK92675 unknown [Populus trichocarpa] | 643 | 7e-065 |
| XP_002321228 predicted protein [Populus trichocarpa] | 642 | 9e-065 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P42814 Ribonuclease 2 | 839 | 6e-089 |
| P42813 Ribonuclease 1 | 211 | 4e-016 |
| Q38717 Ribonuclease S-4 | 208 | 8e-016 |
| Q38716 Ribonuclease S-2 | 206 | 1e-015 |
| P80022 Extracellular ribonuclease LE | 190 | 1e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SF12 Ribonuclease t2, putative | 880 | 2e-092 |
| Q1ECE2 At2g39780 | 839 | 9e-088 |
| B6TGK1 Ribonuclease 2 | 695 | 4e-071 |
| A9P8H2 Putative uncharacterized protein | 643 | 5e-065 |
| B9IAZ9 Predicted protein | 642 | 6e-065 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G39780.1 RNS2 (RIBONUCLEASE 2); RNA binding / endoribonuclease/ ribonuclease T2 | 839 | 5e-090 |
| AT2G39780.2 RNS2 (RIBONUCLEASE 2); RNA binding / endoribonuclease/ ribonuclease T2 | 486 | 4e-049 |
| AT2G02990.1 RNS1 (RIBONUCLEASE 1); endoribonuclease/ ribonuclease | 211 | 3e-017 |
| AT1G14220.1 ribonuclease T2 family protein | 189 | 1e-014 |
| AT1G26820.1 RNS3 (RIBONUCLEASE 3); RNA binding / endoribonuclease/ ribonuclease T2 | 169 | 3e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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