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Information for unigene UN39758
| FASTA Sequence |
| Unigene ID: UN39758 | Length: 932 |
| SNP | GGGTGCGTTTCCAAGCCACTGGACTCCCTTGCCGTCGCTTCCAGTTGGTCAGGAACTTATTCGGAGAACAACAATGGCCACTCAAG
CTGCCTCATTCACTGGCAACTTAAAGAAAGCTGTGGCGGGTATAAAGCGTATCAATCTCGACGGTCTTCGTTGGCGAGTTTTTGAT
GCCAAAGGCCAGGTACTGGGTAGACTAGCATCTCAGATATCAACAGTGCTTCAAGCCAAAGATAAGCCTACTTATTGTCCCAACCG
CGACGATGGCGATATTTGCATTGTTCTCAATGCTAAGGATATCGGCATCACTGGTAGAAAGCTCACTGACAAGTTCTACCGCTGGC
ACACCGGATATGTTGGACACCTGAAAGAACGGAGTCTGAAAGATCAGATGGCCAAAGACCCCACTGAGGTCATCCGCAAGGCTGTC
TGGCGCATGCTTCCTAGTAACAATTTGCGTGATGACAGAGATCGGAAGTTGAGGATATTTGAAGGCAATGAACATCCTTTTGGGGA
CAAGCCACTCGAGCCATTCGTGATGCCGCCTCGTACAGTGAGAGAGATGCGACCCCGCGCTAGGCGAGCAATGATCCGTGCCCAGA
AGAAGGCTGAGCAGGCAGAAAATGGTGGAGGAGAGGTTAAGAAAGGCAAGAAGAGGACTCCTCCTTCTCAAAGTGCAACTGCGTAG
AAGAAAAGCTTCACAGATGTGACTCAGTCTTATTAAGCAACGATCATAATGCAGTCGTGGTGTAAGTTCTTTTTGGTTGTTGAGTG
CCAGACAATAGACACGACGGCCCTATCATAAAGCAAAGCAAAACCCTTAAACATGGTCTCGTTTCTGGTTTAACTGTTAAGCTTTG
TGTTCTTCTGCTGCCAGCCTAGATAAGTGAATACTTTTTGAGGAATGTTAGTAGAATTAAGCATTTATGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882166 ribosomal protein L13 family protein [Arabidopsis lyrata subsp. lyrata] | 976 | 1e-103 |
| NP_186828 large subunit ribosomal protein L13 [Arabidopsis thaliana] | 972 | 4e-103 |
| XP_002323992 predicted protein [Populus trichocarpa] | 867 | 6e-091 |
| XP_002509553 50S ribosomal protein L13, putative [Ricinus communis] | 836 | 2e-087 |
| XP_002300092 predicted protein [Populus trichocarpa] | 833 | 6e-087 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q1AU63 50S ribosomal protein L13 | 324 | 3e-029 |
| Q18CJ1 50S ribosomal protein L13 | 321 | 6e-029 |
| B3EMI6 50S ribosomal protein L13 | 309 | 1e-027 |
| O67722 50S ribosomal protein L13 | 304 | 5e-027 |
| A1AXJ2 50S ribosomal protein L13 | 302 | 9e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q7XA68 At1g01640 | 972 | 3e-103 |
| B9IJJ7 Predicted protein | 867 | 4e-091 |
| B9RBL9 50S ribosomal protein L13, putative | 836 | 2e-087 |
| B9GJD1 Predicted protein | 833 | 4e-087 |
| A9PG49 Putative uncharacterized protein | 827 | 2e-086 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G01790.1 ribosomal protein L13 family protein | 972 | 2e-105 |
| AT3G01790.2 ribosomal protein L13 family protein | 972 | 2e-105 |
| AT1G78630.1 emb1473 (embryo defective 1473); structural constituent of ribosome | 197 | 1e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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