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Information for unigene UN39762

FASTA Sequence
Unigene ID: UN39762Length: 1236 SSR 
CGCCTCTCCCTCTCCCTCTCCCTCTCTCTCTCTCTCTCTCTCTAGAAAAAATAATGGACAACGTAGCACTCTTCTTCACCGGTGCT
CTCGTAGTCGGCGGTATCTACTGGTTCCTATGTGTGCTTGGACCAGCCGAGCGCAAAGGCAAACGAGCCTTGGATCTATCCGGCGG
CACCATCTCCGCCGAGAAAGTTCAAGACAACTACAAACAGTACTGGTCTTTCTTCCGCCGTCCCAAAGAGATCGAAACCGCCGAGA
AAGTCCCAGACTTCGTGGACACGTTCTACAACCTCGTCACCGACATCTACGAGTGGGGATGGGGACAGTCCTTCCACTTCTCCCCT
TCCATCCGTGGCAAATCCCACCGCGACGCCACGCGCCTCCACGAAGAGATGGCCGTAGATCTGATCCAAGTTAAACAGGGTCAGAA
GATCCTCGACGTCGGATGCGGCGTCGGTGGTCCGATGCGCGCGATTGCATCTCACTCGCGAGCCAACGTCGTGGGGATCACGATCA
ACGAGTACCAGGTGAAGAGAGCGCGTGACCACAACAGGAAAGCGGGACTCGACGCGCTCTGCGAGGTCGTGTGCGGCAACTTCCTC
CAGATGCCGTTCGATGATAACACCTTCGACGGCGCGTACTCGATCGAAGCGACTTGTCACGCGCCGAAGCTCGAAGAAGTCTACGC
GGAGATCTACAGGGTGTTGAAGCCCGGATCTCTATACGTGTCGTACGAGTGGGTCACGACGGATAAGTTCGACGCGGAGAATGAGG
AACACGTGGAGGTCATCCAAGGGATCGAGAGAGGAGACGCGCTTCCTGGGCTTAGGGCTTATTCCGACATAGCCGAGGCGGCGAAG
AAGGTTGGATTCGAAGTTGTCAAGGAGAAGGATCTGGCGGCTCCGCCGGCTGAGCCGTGGTGGACTAGGCTTAAGATGGGTCGGCT
AGCTTACTGGAGGAACCACATTGTGGTCCAGGTTTTGTCTGCTGTCGGAGTTGCGCCTAAAGGAACCGTTGATGTTCACGAGATGT
TGTTTAAGACCGCTGATTTCTTGTCCAGAGGAGGCGAAACTGAAATTTTCTCTCCGATGCATATGATTCTCTGCCGGAAACCTATT
TCTTGAAATAGAATCGTCTCCCGATCTCAGTTTGTTTTTAATTTTTTCTTTTTAATGGATTTTTAATCATGCTTGATCTGTCAATG
TACTCTTTTAGATTTTAAAACCGTGTTTAATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173458 24-methylenesterol C-methyltransferase 2 [Arabidopsis thaliana]17641e-194
AAM91592 24-sterol C-methyltransferase [Arabidopsis thaliana]17612e-194
XP_002893098 hypothetical protein ARALYDRAFT_472261 [Arabidopsis lyrata subsp. lyrata]17603e-194
CAA61966 sterol-C-methyltransferase [Arabidopsis thaliana]17594e-194
AAN31890 putative sterol-C-methyltransferase [Arabidopsis thaliana]17568e-194

Swiss-Prot top hits (Blast detail)Scoree value
Q39227 24-methylenesterol C-methyltransferase 217644e-196
Q94JS4 24-methylenesterol C-methyltransferase 316094e-178
O82427 24-methylenesterol C-methyltransferase 213603e-149
Q9LM02 Cycloartenol-C-24-methyltransferase6032e-061
Q6ZIX2 Cycloartenol-C-24-methyltransferase 16022e-061

TrEMBL top hits (Blast detail)Scoree value
B9R8F7 S-adenosyl-l-methionine:delta24-sterol-C-methyltransferase, putative16697e-184
B0FDL8 24-sterol C-methyltransferase16633e-183
B0FDL7 24-sterol C-methyltransferase16591e-182
D2D5G3 Sterol 24-C methyltransferase 2-116544e-182
A9P9Q4 Predicted protein16501e-181

Arabidopsis top hits (Blast detail)Scoree value
AT1G20330.1 SMT2 (STEROL METHYLTRANSFERASE 2); S-adenosylmethionine-dependent methyltransferase17644e-197
AT1G76090.1 SMT3 (STEROL METHYLTRANSFERASE 3); S-adenosylmethionine-dependent methyltransferase/ sterol 24-C-methyltransferase16093e-179
AT5G13710.1 SMT1 (STEROL METHYLTRANSFERASE 1); sterol 24-C-methyltransferase6032e-062
AT5G13710.2 SMT1 (STEROL METHYLTRANSFERASE 1); sterol 24-C-methyltransferase6032e-062
AT1G64970.1 G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE); tocopherol O-methyltransferase1783e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
2118  75%
 
184  17%
 
192  8%

Unigene MembersMember information