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Information for unigene UN39793
| FASTA Sequence |
| Unigene ID: UN39793 | Length: 596 |
SSR | | GGGCACTAGTTCGAGAAACAGAGAGAGAGAGAGAAGAAGAAGAAATGGCTGCTTCAGTGATGCTTTCATCGGTGACGTTGAAACCG
GCGGGTTTCACGGTGGAGAAGATGTCGGCGAGAGGATTACCGTCGCTCGCAAGAGCTCCTTCCTCGTTCAAAATCGTCGCTAGTGG
CGTTAAGAAGATCAAGACCGACAAACCCTTTGGAGTTAACGGCAGCATGGACTTGAGGGACGGCCTCGACGCCTCCGGCAGGAAGG
GCAAGGGATACGGTGTTTACAAATTCGTTGACAAGTACGGAGCTAACGTTGATGGATACAGTCCTATCTACAACGAGGACGAGTGG
TCAGCGAGTGGTGATGTCTACAAGGGAGGAGTCACCGGGTTAGCAATCTGGGCGGTGACACTCGCCGGAATTCTTGCCGGAGGAGC
TCTTCTTGTGTACAACACAAGTGCGCTAGCTCAGTAAATCTATAAGATATGTGTGTAACTCATGTTTCTCTAAATGCTTTTGTGTT
ATTGTTCTTAATGAGTTAATGTTGTTGAAAAACTCATAACATACTTTGAATCTATAAGAATTCTAGCTAGTGTTTGTATA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABL97960 photosystem II 10kDa polytpeptide [Brassica rapa] | 699 | 8e-072 |
| AAO32060 photosystem II 10kDa polypeptide [Brassica rapa subsp. pekinensis] | 689 | 1e-070 |
| P49108 RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic; Flags: Precursor | 688 | 1e-070 |
| ABM54168 PSII 10Kd peptide [Brassica juncea] | 675 | 5e-069 |
| NP_178025 photosystem II subunit R [Arabidopsis thaliana] | 671 | 1e-068 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49108 Photosystem II 10 kDa polypeptide, chloroplastic | 688 | 7e-072 |
| P27202 Photosystem II 10 kDa polypeptide, chloroplastic | 671 | 7e-070 |
| P06183 Photosystem II 10 kDa polypeptide, chloroplastic | 567 | 8e-058 |
| Q40163 Photosystem II 10 kDa polypeptide, chloroplastic | 564 | 2e-057 |
| Q40519 Photosystem II 10 kDa polypeptide, chloroplastic | 547 | 2e-055 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A1YN01 Photosystem II 10kDa polytpeptide | 699 | 5e-072 |
| Q84XP6 Photosystem II 10kDa polypeptide (Fragment) | 689 | 8e-071 |
| A1Z271 PSII 10Kd peptide | 675 | 3e-069 |
| Q0WWI7 PSII-R protein | 671 | 9e-069 |
| B4YYB9 ST244 | 638 | 6e-065 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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