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Information for unigene UN39832
| FASTA Sequence |
| Unigene ID: UN39832 | Length: 549 |
SSR | | GGGAAACCGATAGATAACGATTCAGAGAGAGAGAGAGAGAGAGAGGGTTAAATCAAACGTAAATTTCAAGCAATGGCATCGATGAC
AATGACAGCAACGTTCCTCCCAGCCGTCGCTAAGCTTCCGTCACCCACCGCAGGAAGAAGGATGTCCATTGTCAGAGCCTCGACGA
GCGAGAACACACCCAGCTTAGAAGTCAAGGCCAAGGAGGAACAAAGCAGCACCACAATGAGGAGGGATCTCATGTTCACGGCTGCA
GCTTCTGCCGTTTGTGCCTTGGCTAAGGTAGCCATGGCGGACGAGGAGGAGCCCAAGCGAGGGACAGAGGCGGCTAAGAAGAAATA
CGCTCAAGTCTGTGTCACAATGCCTACGGCCAAGGTCTGCCGCTACTGATTCAGCCATCCACCTTTAATGTCCTTATCTCTATCTA
TTTCTATGGTTCAGTATCTCAAATTTGGTATGTAATCATATATTTGGATCAAAATCTTATAATCTTCAACTAGACTTCCTTTCCAT
TATAATGAAAACTTAAAAGAAGCATTGCATAGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABD91572 unknown [Brassica rapa] | 481 | 1e-046 |
| NP_566674 photosystem II subunit T [Arabidopsis thaliana] | 458 | 5e-044 |
| XP_002862672 hypothetical protein ARALYDRAFT_920397 [Arabidopsis lyrata subsp. lyrata] | 456 | 9e-044 |
| CAA66701 photosystem II [Arabidopsis thaliana] | 445 | 2e-042 |
| BAJ34522 unnamed protein product [Thellungiella halophila] | 351 | 1e-031 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39195 Photosystem II 5 kDa protein, chloroplastic | 458 | 3e-045 |
| P31336 Photosystem II 5 kDa protein, chloroplastic | 204 | 8e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q1WBW8 Putative uncharacterized protein | 481 | 8e-047 |
| Q8LFE2 Photosystem II | 338 | 3e-030 |
| Q9SYE2 At1g51400/F5D21_10 | 338 | 3e-030 |
| A9PH14 Predicted protein | 262 | 2e-021 |
| A9PIN3 Putative uncharacterized protein | 262 | 2e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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